Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gggcgcggcggcaaccgcgcgagcctgcgactgcttctggcctacgtccgtgtgacttggaggtttgtcatgagtgtaacgggctcggtgcattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAGAAGATGAAGTATGACCGCTTCCTGCGCAAGCGCATGAACACCAACCCCA

Basic information

species Chlamydomonas reinhardtii
transcript EDP03478
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EDP03478 (Chlamydomonas reinhardtii), 3'ss of exon 2
lower sequence: EFJ34798 (Selaginella moellendorffii), 3'ss of exon 1
gggcgcggcggcaaccgcgcgagcctgcgactgcttctggcctacgtccgtgtgacttggaggtttgtcatgagtgtaacgggctcggtgcattttg---cagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAGAAGATGAAGTATGACCGCTTCCTGCGCAAGCGCATGAACACCAACCCCA
                                             ||        || |     ||   ||| |  ||  |  |||  | || | ||   |||||  ||   ||   |||||||||| |  ||||||||||||| || |||||||||||||||||     | || ||| | |||||||||||||| || ||||
---------------------------------------------gtagaaaaatctcgcgatcttagaatgcgc-tattgatctctttccactgtgttccagGTTATCACGCGATGCGAGGAGATTGCTCTCTCGGGCGGCCTCGTCCGCCAGAAGATGAAGTACCTGAGGTTTCTGAGGAAGCGCATGAACACGAAGCCCA

upper sequence: EDP03478 (Chlamydomonas reinhardtii), 3'ss of exon 2
lower sequence: EFJ23532 (Selaginella moellendorffii), 3'ss of exon 1
gggcgcggcggcaaccgcgcgagcctgcgactgcttctggcctacgtccgtgtgacttggaggtttgtcatgagtgtaacgggctcggtgcattttg---cagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAGAAGATGAAGTATGACCGCTTCCTGCGCAAGCGCATGAACACCAACCCCA
                                             ||        || |     ||   ||| |  ||  |  |||  | || | ||   |||||  ||   ||   |||||||||| |  ||||||||||||| || |||||||||||||||||     | || ||| | ||||||||||||||||| ||||
---------------------------------------------gtagaaaaatctcgcgatcttagaatgcgc-tattgatctctttccactgtgttccagGTTATCACGCGATGCGAGGAGATTGCTCTCTCGGGCGGCCTCGTCCGCCAGAAGATGAAGTACCTGAGGTTTCTGAGGAAGCGCATGAACACCAAGCCCA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|161812700|gb|FC099439.1|FC099439
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49465559|gb|BP093472.1|BP093472
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161795727|gb|FC083954.1|FC083954
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161817167|gb|FC100769.1|FC100769
EST:     GCCGCCTGGCTTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49461349|gb|BP089262.1|BP089262
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22070656|gb|BQ819994.1|BQ819994
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49465484|gb|BP093397.1|BP093397
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49459573|gb|BP087486.1|BP087486
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22075318|gb|BQ824094.1|BQ824094
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|7545782|gb|AW676270.1|AW676270
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49468725|gb|BP096586.1|BP096586
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|16072090|gb|BI874086.1|BI874086
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|10790747|gb|AV628113.1|AV628113
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161809876|gb|FC094697.1|FC094697
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49470333|gb|BP098194.1|BP098194
EST:     CCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTNTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCG
genomic: CCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCT-TGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCG
EST: gi|10779988|gb|AV636668.1|AV636668
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|7615668|gb|AW721108.1|AW721108
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34992442|gb|CF566359.1|CF566359
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161809875|gb|FC094696.1|FC094696
EST:     GGGCAGCAGATT                         GTGGTTGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTTCGCCAG
genomic: GGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|14240849|gb|BG859665.1|BG859665
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTTCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCNCA
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGC-CA
EST: gi|22052788|gb|BQ810401.1|BQ810401
EST:     GGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22067594|gb|BQ817656.1|BQ817656
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34989104|gb|CF563021.1|CF563021
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|10779306|gb|AV635986.1|AV635986
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161817168|gb|FC100770.1|FC100770
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22073041|gb|BQ822379.1|BQ822379
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22049217|gb|BQ808666.1|BQ808666
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161796317|gb|FC083400.1|FC083400
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49460297|gb|BP088210.1|BP088210
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|55562639|gb|AV637706.2|AV637706
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22063988|gb|BQ815538.1|BQ815538
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161803184|gb|FC093203.1|FC093203
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161799052|gb|FC082415.1|FC082415
EST:     GCCGCCTGGCCTTTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34989904|gb|CF563821.1|CF563821
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34982005|gb|CF555922.1|CF555922
EST:     AGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCCCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: AGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22076798|gb|BQ825574.1|BQ825574
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161814807|gb|FC100649.1|FC100649
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49461249|gb|BP089162.1|BP089162
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161796316|gb|FC083399.1|FC083399
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34982006|gb|CF555923.1|CF555923
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|6546721|gb|AV392505.1|AV392505
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22052790|gb|BQ810403.1|BQ810403
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49464629|gb|BP092542.1|BP092542
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161803505|gb|FC089364.1|FC089364
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34982007|gb|CF555924.1|CF555924
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22049220|gb|BQ808667.1|BQ808667
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161794631|gb|FC077879.1|FC077879
EST:     GCCGCCTGGCCTTTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTTCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|10782462|gb|AV639142.1|AV639142
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|16072271|gb|BI874267.1|BI874267
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGGTGCGCCA
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCT-GGTGCGCCA
EST: gi|22076528|gb|BQ825304.1|BQ825304
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161811962|gb|FC096152.1|FC096152
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34994514|gb|CF568431.1|CF568431
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|9458820|gb|BE452542.1|BE452542
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22052795|gb|BQ810404.1|BQ810404
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161799053|gb|FC082416.1|FC082416
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22072698|gb|BQ822036.1|BQ822036
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|10783137|gb|AV639809.1|AV639809
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|16432870|gb|BI998096.1|BI998096
EST:     GGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49466476|gb|BP094389.1|BP094389
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49467006|gb|BP094919.1|BP094919
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|10785634|gb|AV642306.1|AV642306
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34989103|gb|CF563020.1|CF563020
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34982629|gb|CF556546.1|CF556546
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|7709616|gb|AW772987.1|AW772987
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|7546053|gb|AW676541.1|AW676541
EST:     GGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22073039|gb|BQ822377.1|BQ822377
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|6552183|gb|AV397967.1|AV397967
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161812621|gb|FC099438.1|FC099438
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTTGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161800350|gb|FC082790.1|FC082790
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|15696929|gb|BI721234.1|BI721234
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|6552226|gb|AV398010.1|AV398010
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|6552236|gb|AV398020.1|AV398020
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34984855|gb|CF558772.1|CF558772
EST:     CTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: CTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|7545781|gb|AW676269.1|AW676269
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161803185|gb|FC093204.1|FC093204
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34987843|gb|CF561760.1|CF561760
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|6551230|gb|AV397014.1|AV397014
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|6547442|gb|AV393226.1|AV393226
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34993591|gb|CF567508.1|CF567508
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22076529|gb|BQ825305.1|BQ825305
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22072699|gb|BQ822037.1|BQ822037
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34991934|gb|CF565851.1|CF565851
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49465777|gb|BP093690.1|BP093690
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49469094|gb|BP096955.1|BP096955
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161790310|gb|FC077089.1|FC077089
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34989903|gb|CF563820.1|CF563820
EST:     GGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161803506|gb|FC089365.1|FC089365
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|10775530|gb|AV632210.1|AV632210
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|7545729|gb|AW676217.1|AW676217
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161800349|gb|FC082789.1|FC082789
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTTGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34984856|gb|CF558773.1|CF558773
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49467432|gb|BP095345.1|BP095345
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|10780061|gb|AV636741.1|AV636741
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|161794632|gb|FC077880.1|FC077880
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34988432|gb|CF562349.1|CF562349
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34990304|gb|CF564221.1|CF564221
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|49460147|gb|BP088060.1|BP088060
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22049216|gb|BQ808665.1|BQ808665
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|34982008|gb|CF555925.1|CF555925
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
EST: gi|22073040|gb|BQ822378.1|BQ822378
EST:     GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATT                         GTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG
genomic: GCCGCCTGGCCTCTGTGGTGGCCAAGCAGATTCTTGCCGGGCAGCAGATTgtaagcagtg ... cattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtccgtgtgacttggaggtttgtcatgagtgtaacgggctcggtgcattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAGAAGATGAAGTATGACCGCTTCCTGCGCAAGCGCATGAACACCAACCCCA
                            gtgtaac  putative branch site (score: 3)
                                              atttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gggcgcggcggcaaccgcgcgagcctgcgactgcttctggcctacgtccgtgtgacttggaggtttgtcatgagtgtaacgggctcggtgcattttgcagGTGGTCGTCCGCGCCGAGGAGATTACCATCTCGGGCGGCCTGGTGCGCCAGAAGATGAAGTATGACCGCTTCCTGCGCAAGCGCATGAACACCAACCCCA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGATG
- - - - - - - - - - - - - - - - - - - - - - - -ccgtgtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggtttgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgagtgt