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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgcggcgcagcggttcgtctggcctgggtgacgcgctctgggcagagtcgcgtataggcccagcccagtcgcagaacgacctgtgcggtgactgaaactgacgccctaacttcctgtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTTGTAAACATTATGTTCCCTCCGGACTACCCGTTCAAGCCCCCGAAGGTGA

Basic information

species Chlamydomonas reinhardtii
transcript EDO98738
intron # 2
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10770281|gb|AV621106.1|AV621106
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|14226605|gb|BG845437.1|BG845437
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10773113|gb|AV623936.1|AV623936
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10781533|gb|AV638213.1|AV638213
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|8513778|gb|BE121673.1|BE121673
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10780538|gb|AV637218.1|AV637218
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|22068097|gb|BQ818047.1|BQ818047
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10771109|gb|AV621932.1|AV621932
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|49462537|gb|BP090450.1|BP090450
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10191437|gb|BE761513.1|BE761513
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10771256|gb|AV622079.1|AV622079
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|6541542|gb|AV387326.1|AV387326
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|55562633|gb|AV624073.2|AV624073
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|9461041|gb|BE453535.1|BE453535
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10772092|gb|AV622915.1|AV622915
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10771174|gb|AV621997.1|AV621997
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|8400970|gb|BE056604.1|BE056604
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|8933117|gb|BE227878.1|BE227878
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|161822462|gb|FC109217.1|FC109217
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|8828122|gb|BE211964.1|BE211964
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|23361073|gb|BU648893.1|BU648893
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|49463151|gb|BP091064.1|BP091064
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|14239897|gb|BG858713.1|BG858713
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|49464890|gb|BP092803.1|BP092803
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|22054721|gb|BQ811487.1|BQ811487
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10770314|gb|AV621139.1|AV621139
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|22075597|gb|BQ824373.1|BQ824373
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|49458252|gb|BP086165.1|BP086165
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|49464976|gb|BP092889.1|BP092889
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10776974|gb|AV633654.1|AV633654
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|49462175|gb|BP090088.1|BP090088
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|22076451|gb|BQ825227.1|BQ825227
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10128259|gb|BE726963.1|BE726963
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|8933081|gb|BE227842.1|BE227842
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10781173|gb|AV637853.1|AV637853
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|8576667|gb|BE129304.1|BE129304
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10777043|gb|AV633723.1|AV633723
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|9210517|gb|BE337432.1|BE337432
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10773698|gb|AV624521.1|AV624521
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|49458367|gb|BP086280.1|BP086280
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|6545987|gb|AV391771.1|AV391771
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|22061172|gb|BQ814121.1|BQ814121
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAAGGCGTGTTCTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGA-GGCGTGTTCTT
EST: gi|49463815|gb|BP091728.1|BP091728
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|22060484|gb|BQ813805.1|BQ813805
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|8513846|gb|BE121741.1|BE121741
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|6551868|gb|AV397652.1|AV397652
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|49461569|gb|BP089482.1|BP089482
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10770894|gb|AV621717.1|AV621717
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|49463459|gb|BP091372.1|BP091372
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10126442|gb|BE725146.1|BE725146
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10772061|gb|AV622884.1|AV622884
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|23365957|gb|BU653777.1|BU653777
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10773703|gb|AV624526.1|AV624526
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10780969|gb|AV637649.1|AV637649
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|16071962|gb|BI873958.1|BI873958
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|6547270|gb|AV393054.1|AV393054
EST:     GCGGNGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: GCGG-GCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|8513636|gb|BE121531.1|BE121531
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|6543489|gb|AV389273.1|AV389273
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|22075504|gb|BQ824280.1|BQ824280
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10773848|gb|AV624671.1|AV624671
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|10772652|gb|AV623475.1|AV623475
EST:     CCACCTCGTGCAGTGCGGGNCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|6546371|gb|AV392155.1|AV392155
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|49462882|gb|BP090795.1|BP090795
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|22068196|gb|BQ818135.1|BQ818135
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
EST: gi|8286753|gb|BE024312.1|BE024312
EST:     CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAG                         GCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT
genomic: CCACCTCGTGCAGTGCGGGCCCTGCGGGCGATGATCTCTTCCACTGGCAGgtgcggcgca ... gtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcagaacgacctgtgcggtgactgaaactgacgccctaacttcctgtccttatagGCCACCATTATGGGCCCCAGCGACAGCCCCTACGCGGGAGGCGTGTTCTTTGTAAACATTATGTTCCCTCCGGACTACCCGTTCAAGCCCCCGAAGGTGA
                                 ccctaac  putative branch site (score: 2)
                                       cttcctgtccttat  CT-rich tract
                                                 ttata  TA-rich tract