Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagctccgacgcgacctcttgtgaccacacgcagcactctgcttcggcgatggcgcgctttgccgccctacgcttcttctcgcaggctgagcctcacctcttgaatgtatgcctgaccttacatttttcctgccccctatgctgcctgtcccaaacagCTGGCCAGCAAGACCGAGGTGGAGCGCTTCAAGCAGGCGACTGGCCTGCCCGCGCCCGCCATCAACGGCAAGCAGTTCCCCCTCAAG

Basic information

species Chlamydomonas reinhardtii
transcript EDP09661
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aatgtatgcctgaccttacatttttcctgccccctatgctgcctgtcccaaacagCTGGCCAGCAAGACCGAGGTGGAGCGCTTCAAGCAGGCGACTGGCCTGCCCGCGCCCGCCATCAACGGCAAGCAGTTCCCCCTCAAG
            accttac  putative branch site (score: 3)
                                         cctgtccc  putative PPT
               ttacattttt  TA-rich tract