1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgtggcctaaggacattattaaaaagacatcagtagcctcgcgcaaggcgccgtggccgcagcagcatgatcaacccccttttgctgtggcgcggtgcttgctggcgcgcagAAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAGCTGCCCTATGAGTACTATTCGCTGCCCTACTGCCGGCCGGAGAAGATCG
species | Chlamydomonas reinhardtii |
transcript | EDP05803 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CCTGCCCGGTGTTGCTCCCCAGGATTTCAAGAAG AAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAGEST: gi|49465960|gb|BP093873.1|BP093873
genomic: CCTGCCCGGTGTTGCTCCCCAGGATTTCAAGAAGgtgtggccta ... tggcgcgcagAAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAG
EST: CCGCGCTGGGCTTCTACCTGCCCGGTGTTGCTCCCCAGGATTTCAAGAAG AAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAGEST: gi|10783391|gb|AV640063.1|AV640063
genomic: CCGCGCTGGGCTTCTACCTGCCCGGTGTTGCTCCCCAGGATTTCAAGAAGgtgtggccta ... tggcgcgcagAAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAG
EST: CCGCGCTGGGCTTCTACCTGCCCGGTGTTGCTCCCCAGGATTTCAAGAAG AAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAGEST: gi|49469214|gb|BP097075.1|BP097075
genomic: CCGCGCTGGGCTTCTACCTGCCCGGTGTTGCTCCCCAGGATTTCAAGAAGgtgtggccta ... tggcgcgcagAAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAG
EST: CCGCGCTGGGCTTCTACCTGCCCGGTGTTGCTCCCCAGGATTTCAAGAAG AAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAGEST: gi|10789138|gb|AV626858.1|AV626858
genomic: CCGCGCTGGGCTTCTACCTGCCCGGTGTTGCTCCCCAGGATTTCAAGAAGgtgtggccta ... tggcgcgcagAAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAG
EST: CCGCGCTGGGCTTCTACCTGCCCGGTGTTGCTCCCCAGGATTTCAAGAAG AAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAGEST: gi|16438403|gb|BM003623.1|BM003623
genomic: CCGCGCTGGGCTTCTACCTGCCCGGTGTTGCTCCCCAGGATTTCAAGAAGgtgtggccta ... tggcgcgcagAAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAG
EST: CCGCGCTGGGCTTCTACCTGCCCGGTGTTGCTCCCCAGGATTTCAAGAAG AAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAG
genomic: CCGCGCTGGGCTTCTACCTGCCCGGTGTTGCTCCCCAGGATTTCAAGAAGgtgtggccta ... tggcgcgcagAAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgtggcctaaggacattattaaaaagacatcagtagcctcgcgcaaggcgccgtggccgcagcagcatgatcaacccccttttgctgtggcgcggtgcttgctggcgcgcagAAAGACGTGCTGTTCCTGAAGGTCAACAAGCTGTCCTCCATCAAGAACCAGCTGCCCTATGAGTACTATTCGCTGCCCTACTGCCGGCCGGAGAAGATCG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA