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gtgcgcacacggcgcagtgcggtctttagcgaggacatcttccgtgggtggaggcgagctcgaactctgcttctgtgctgctgcatgtagGATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCCCGTATTTCGTCGCTGCTGGTGCGGAAGTCTGCCAAGCAGTGCAAAGCAC
species | Chlamydomonas reinhardtii |
transcript | EDP03322 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAG GATGAAATCCTCAAGGCGGCAGTGEST: gi|10784250|gb|AV640922.1|AV640922
genomic: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAGgtgcgcacac ... ctgcatgtagGATGAAATCCTCAAGGCGGCAGTG
EST: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAG GATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCCEST: gi|10787044|gb|AV643716.1|AV643716
genomic: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAGgtgcgcacac ... ctgcatgtagGATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCC
EST: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAG GATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCCEST: gi|10793480|gb|AV630846.1|AV630846
genomic: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAGgtgcgcacac ... ctgcatgtagGATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCC
EST: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAG GATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCCEST: gi|10789162|gb|AV626882.1|AV626882
genomic: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAGgtgcgcacac ... ctgcatgtagGATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCC
EST: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAG GATGAAATCCTCEST: gi|10785473|gb|AV642145.1|AV642145
genomic: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAGgtgcgcacac ... ctgcatgtagGATGAAATCCTC
EST: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAG GATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCCEST: gi|10784017|gb|AV640689.1|AV640689
genomic: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAGgtgcgcacac ... ctgcatgtagGATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCC
EST: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAG GATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCCEST: gi|10789114|gb|AV626834.1|AV626834
genomic: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAGgtgcgcacac ... ctgcatgtagGATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCC
EST: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAG GATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCC
genomic: CAGCTGCCATGAGGATTATGATCAAGGGCGGTGTTTGGAAAAACACCGAGgtgcgcacac ... ctgcatgtagGATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgcgcacacggcgcagtgcggtctttagcgaggacatcttccgtgggtggaggcgagctcgaactctgcttctgtgctgctgcatgtagGATGAAATCCTCAAGGCGGCAGTGATGAAGTATGGGCTCAACCAGTGGGCCCGTATTTCGTCGCTGCTGGTGCGGAAGTCTGCCAAGCAGTGCAAAGCAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG