Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgcgccacagggtcatatttgtgcagcgcctgatcggggcaagaatattgtgcgcgtgggagaatcggctgcagcatcgcctgacaaaccgtttgacgcgcgggctaatttcgcttcctttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCGAACTTCGTGTCCTGCGTGATTGAAATCCCTCGCGGTTCCAAGGTCAAG

Basic information

species Chlamydomonas reinhardtii
transcript EDP02064
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|161821353|gb|FC109492.1|FC109492
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|14238456|gb|BG857272.1|BG857272
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGCAG                       
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCT--A-CAGgtgcgccaca ... ttgctagc
EST: gi|14231499|gb|BG850315.1|BG850315
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10776946|gb|AV633626.1|AV633626
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10772597|gb|AV623420.1|AV623420
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|14233776|gb|BG852592.1|BG852592
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161821967|gb|FC107623.1|FC107623
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|49458864|gb|BP086777.1|BP086777
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161815965|gb|FC099916.1|FC099916
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10776800|gb|AV633480.1|AV633480
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161809458|gb|FC096515.1|FC096515
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161794542|gb|FC080819.1|FC080819
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|49458879|gb|BP086792.1|BP086792
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|49464864|gb|BP092777.1|BP092777
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGCAG                       
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCT--A-CAGgtgcgccaca ... ttgctagc
EST: gi|34990467|gb|CF564384.1|CF564384
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161822375|gb|FC111125.1|FC111125
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10776376|gb|AV633056.1|AV633056
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|8933173|gb|BE227934.1|BE227934
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|14231498|gb|BG850314.1|BG850314
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCNACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10780438|gb|AV637118.1|AV637118
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|16072471|gb|BI874467.1|BI874467
EST:     GTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCC
genomic: GTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCT---ACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCC
EST: gi|161818141|gb|FC102289.1|FC102289
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|7545660|gb|AW676148.1|AW676148
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10780441|gb|AV637121.1|AV637121
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10777324|gb|AV634004.1|AV634004
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|14238480|gb|BG857296.1|BG857296
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161797736|gb|FC085184.1|FC085184
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161809582|gb|FC097393.1|FC097393
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10126294|gb|BE724998.1|BE724998
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|49460279|gb|BP088192.1|BP088192
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10776931|gb|AV633611.1|AV633611
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161793042|gb|FC081360.1|FC081360
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161800748|gb|FC084709.1|FC084709
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161817310|gb|FC104916.1|FC104916
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|14229106|gb|BG847922.1|BG847922
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10780662|gb|AV637342.1|AV637342
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10782227|gb|AV638907.1|AV638907
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|15371771|gb|BI531197.1|BI531197
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10781224|gb|AV637904.1|AV637904
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10781486|gb|AV638166.1|AV638166
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161819523|gb|FC108312.1|FC108312
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10775146|gb|AV625969.1|AV625969
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|14231500|gb|BG850316.1|BG850316
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10774352|gb|AV625175.1|AV625175
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|14240092|gb|BG858908.1|BG858908
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGNCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCG-CCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCC
EST: gi|161811254|gb|FC095353.1|FC095353
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|49459736|gb|BP087649.1|BP087649
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGACTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|34990466|gb|CF564383.1|CF564383
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161823017|gb|FC106587.1|FC106587
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10782615|gb|AV639287.1|AV639287
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|22071487|gb|BQ820825.1|BQ820825
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161802096|gb|FC089658.1|FC089658
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|15369487|gb|BI528913.1|BI528913
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10780986|gb|AV637666.1|AV637666
EST:     GCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|14242577|gb|BG861393.1|BG861393
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161817261|gb|FC104906.1|FC104906
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161798476|gb|FC085427.1|FC085427
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161793555|gb|FC078467.1|FC078467
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10782077|gb|AV638757.1|AV638757
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|49459606|gb|BP087519.1|BP087519
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|49459731|gb|BP087644.1|BP087644
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161823426|gb|FC105748.1|FC105748
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|16071678|gb|BI873674.1|BI873674
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161820862|gb|FC108949.1|FC108949
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10779395|gb|AV636075.1|AV636075
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|15368172|gb|BI527598.1|BI527598
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|49459755|gb|BP087668.1|BP087668
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|7545580|gb|AW676068.1|AW676068
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|161803656|gb|FC090568.1|FC090568
EST:     GTCTTTTGTGCGGTTCTCTGCCTGCGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|10770819|gb|AV621644.1|AV621644
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCC
EST: gi|14229353|gb|BG848169.1|BG848169
EST:     GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAG                         GGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGGCCC
genomic: GTCGTTTGTGCGGTTCTCTACCTACGCGTTTGAAAGATGTCCTTCTACAGgtgcgccaca ... ttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGAC-GCCC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

catcgcctgacaaaccgtttgacgcgcgggctaatttcgcttcctttgctagcagGGGAACCGCCTCGCATCCGTGGCACGACCTGCACCCGGGCAACGACGCCCCGAACTTCGTGTCCTGCGTGATTGAAATCCCTCGCGGTTCCAAGGTCAAG
                            ggctaat  putative branch site (score: 3)
                                  tttcgcttcctttgct  CT-rich tract
                               taattt  TA-rich tract