Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagcatcagttggtatgcgacctcggtgttcgcgttctttgaggcccggggacatggacgccgggcctagcgacgcttgtcggcgcacagcctgcggcgcgcgctttcttcggccgcaaatttatttccccaatgtatgcttacacacctgtatttgctcgttgtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGATCCCCGGCGTGCCCAACCTGCAGGTCATTAAGCTCATGCAGAGCTTCAA

Basic information

species Chlamydomonas reinhardtii
transcript EDP00807
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EDP00807 (Chlamydomonas reinhardtii), 3'ss of exon 1
lower sequence: LOC_Os04g35090.1 (Oryza sativa), 3'ss of exon 2
gtgagcatcagttggtatgcgacctcggtgttcgcgttctttgaggcccggggacatggacgccgggcctagcgacgcttgtcggcgcacagcctgcggcgcgcgctttcttcggccgcaaatttatttccccaatgtatgcttacacacctgtatttgctcgttgtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGATCCCCGGCGTGCCCAACCTGCAGGTCATTAAGCTCATGCAGAGCTTCAA---
                                                                    ||   |  |  |||| |  ||  |   ||   ||       ||    | | ||| | |||       ||   | ||  ||    || | |||| |||||    |||||||| || ||  | ||  ||||||||| ||||||   | |||||||| |||||   |  ||||| ||||||||||| || ||||||||||||||||||||   
------------------------------------------------------------------cgctgttggtgtatgtcagtacagcgttcgca-tgccaagaggctcaaactg-aaagtgattgta--ggtgctggttttaac-ttggtgtatgct-gttgt---tgcagAGGGAGTGCTGTATGCCAAGAAGGACTACAACCTGGCGAAGCACCCGCAGATC---GATGTGCCGAACCTGCAGGTGATCAAGCTCATGCAGAGCTTCAAGTC

upper sequence: EDP00807 (Chlamydomonas reinhardtii), 3'ss of exon 1
lower sequence: LOC_Os01g73160.1 (Oryza sativa), 3'ss of exon 2
gtgagcatcagttggtatgcgacctcggtgttcgcgttctttgaggcccggggacatggacgccgggcctagcgacgcttgtcggcgcacagcctgcggcgcgcgctttcttcggccgcaaatttatttccccaatgtatgcttacacacctgtatttgctcgttgtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGATCCCCGGCGTGCCCAACCTGCAGGTCATTAAGCTCATGCAGAGCTTCAA---
                                                                    |  |      |||   |  ||  |  |  |  |   || |   | |   | |  |||||||      | |  | | |    |    ||||  |     |    |||||||| ||| |  | ||  ||||||||| ||||||     |||||||  || |    |  ||||||||| || |||| |||||||||||||||||||||||   
-------------------------------------------------------------------acatgttttatttgattggtcat-gtatttgctgaaggcctgaat-gatggtacctttatttgt----tatgagttgaagtgcta--atttaattcaactatatgcagAGGGAGTCTTGTATGCCAAGAAGGACTACAACCTGGCCAAGCACCCAAAGGTT---GATGTGCCCAACTTGGAGGTGATTAAGCTCATGCAGAGCTTCAAGTC

upper sequence: EDP00807 (Chlamydomonas reinhardtii), 3'ss of exon 1
lower sequence: LOC_Os02g34460.1 (Oryza sativa), 3'ss of exon 2
gtgagcatcagttggtatgcgacctcggtgttcgcgttctttgaggcccggggacatggacgccgggcctagcgacgcttgtcggcgcacagcctgcggcgcgcgctttcttcggccgcaaatttatttccccaatgtatgcttacacacctgtatttgctcgttgtgcg-cgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGATCCCCGGCGTGCCCAACCTGCAGGTCATTAAGCTCATGCAGAGCTTCAA---
                                                                     ||   |  |   |  |    || |||    ||   | |    | |   |  |  || |||| |   | |    ||       || |||     || ||||  |  |||||| ||  |  | ||  ||||||||| |||  |     | |||||  ||||    |  ||||| ||||| |||||||| ||||||||||||||||||||   
--------------------------------------------------------------------ataataagacc-atatgtcttcatcctatttcgactgatgaactagaaggata--ttgtttctcatttcttcatttgtttgtgtgcatt-----gtggtgcatcatagAGGGGGTTTTGTACGCCAAGAAGGACTACAATTTGGCAAAACACCCACAGATT---GATGTGCCAAACCTTCAGGTCATCAAGCTCATGCAGAGCTTCAAGTC

upper sequence: EDP00807 (Chlamydomonas reinhardtii), 3'ss of exon 1
lower sequence: GRMZM2G171484_T01 (Zea mays), 3'ss of exon 2
gtgagcatcagttggtatgcgacctcggtgttcgcgttctttgaggc-ccggggacatggacgccgggcctagcgacgcttgtcggcgcacagcctgcg-gcgcgcgctttcttcgg-ccgcaaatttatttccccaatgtatgcttacacacctgtatttgctcg-ttgtgcgc-gcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGATCCCCGGCGTGCCCAACCTGCAGGTCATTAAGCTCATGCAGAGCTTCAA---
||||||  |      | | |  ||||   |  ||    | | |  || ||    | | |           |||       |  |    || |   | |  ||    ||  | |||||  ||   |         ||  |   ||  |  | |     |   | ||   | |  |  |||||||| || ||  | ||  ||||||||| ||||||     |||||||  ||   |  | ||||||||||||| |||| |||||||||||||||||||||||   
gtgagctcct-----tctcctccctcttcgcccgtccccctaggcgcgcccaatataagattatttcat-tagatttagataccaattcagacattacaagcattagcaatattcggatcgtgtacgacccaagcccgtccttgtct-tagattgagaaccgttcaactttatgttgcagAGGGGGTTCTATATGCCAAGAAGGACTACAACCTGGCCAAGCACCCCAAG---CTTGACGTGCCCAACCTGGAGGTGATTAAGCTCATGCAGAGCTTCAAGTC

upper sequence: EDP00807 (Chlamydomonas reinhardtii), 3'ss of exon 1
lower sequence: GRMZM2G050925_T01 (Zea mays), 3'ss of exon 2
gtgagcatcagttggtatgcgacctcggtgttcgcgttctttgaggcccggggacatggacgccgggcctagcgacgcttgtcggcgcacagcctgcggcgcgcgctttcttcggccgcaaatttatttccccaatgtatgcttacacacctgtatttgctcgttgtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGATCCCCGGCGTGCCCAACCTGCAGGTCATTAAGCTCATGCAGAGCTTCAA---
                                                                 |  |||   |      ||  || | |       ||  | |  |  |  |        | | ||    |  | | || |     |  |  || || | | ||     |||||||| || ||  | ||  ||||||||| ||||||   | |||||||  ||||    |  ||||||||||| ||||| || ||||||||||||||||||||   
-----------------------------------------------------------------gttctatgtatatccatcaccg-agaattgaaagcatg-gtctgatgtgatgtgtgctatgttcatacggtttctgtt-----agtttgatgtgtttgctgc---tgcagAGGGCGTGCTGTATGCCAAGAAGGACTACAACCTGGCGAAGCACCCACAGATT---GATGTGCCCAACCTCCAGGTGATCAAGCTCATGCAGAGCTTCAAGTC

upper sequence: EDP00807 (Chlamydomonas reinhardtii), 3'ss of exon 1
lower sequence: GRMZM2G446960_T01 (Zea mays), 3'ss of exon 2
gtgagcatcagttggtatgcgacctcggtgttcgcgttctttgaggcccggggacatggacgccgggcctagcgacgcttgtcggcgcacagcctgcggcgcgcgctttcttcggccgcaaatttatttccccaatgtatgcttacacacctgtatttgctcgttgtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGATCCCCGGCGTGCCCAACCTGCAGGTCATTAAGCTCATGCAGAGCTTCAA---
                                                          |||      |  |    |  |  |||    |     | || | |  | ||      |    |  || |        | ||||   |  | | |||| ||  ||  | ||||    |||||| ||| |  | ||  ||||||||| ||||||     |||||||  ||   |  |  ||||||||| || |||| |||||||||||||||||||||||   
---------------------------------------------------------agacattatacgcattagcaatattcg---tattatgtacgaccctagtttatccttgttttaggttga--------aggtata--tgtaaaactgt-ttaacttatggtgc----agAGGGGGTCTTGTACGCCAAGAAGGACTACAACCTGGCCAAGCACCCCAAG---CTTGATGTGCCCAACTTGGAGGTGATTAAGCTCATGCAGAGCTTCAAGTC

upper sequence: EDP00807 (Chlamydomonas reinhardtii), 3'ss of exon 1
lower sequence: GRMZM2G065237_T01 (Zea mays), 3'ss of exon 2
gtgagcatcagttggtatgcgacctcggtgttcgcgttctttgaggcccggggacatggacgccgggcctagcgacgcttgtcggcgcacagcctgcggcgcgcgctttcttcggccgcaaatttatttccccaatgtatgcttacacacctgtatttgctcgttgtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGATCCCCGGCGTGCCCAACCTGCAGGTCATTAAGCTCATGCAGAGCTTCAA---
                                                              ||     ||     ||   |      |  |  | |        | ||| || ||   |  || ||        |||  | ||       ||||||||||  |       |||||||| || ||  | ||  ||||||||| ||||||   | |||||||| |||||   |  ||||||||||| ||||| || ||||||||||||||||| ||   
-------------------------------------------------------------tccaaatttatt--tgccccttaaactatggattccttgttatacattcatctgcgttatgttcatacgatttctgttagtttga-----tgtatttgctgct-------gcagAGGGCGTGCTGTATGCCAAGAAGGACTACAACCTGGCGAAGCACCCGCAGATC---GATGTGCCCAACCTCCAGGTGATCAAGCTCATGCAGAGCTTTAAGTC

upper sequence: EDP00807 (Chlamydomonas reinhardtii), 3'ss of exon 1
lower sequence: GRMZM2G043737_T01 (Zea mays), 3'ss of exon 2
gtgagcatcagttggtatgcgacctcggtgttcgcgttctttgaggcccggggacatggacgccgggcctagcgacgcttgtcggcgcacagcctgcggcgcgcgctttcttcggccgcaaatttatttccccaatgtatgcttacacacctgtatttgctcgttgtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGATCCCCGGCGTGCCCAACCTGCAGGTCATTAAGCTCATGCAGAGCTTCAA---
                                                              ||     ||     ||          |  |  | |        | ||| || ||   |  || ||        |||  | ||       ||||||||||  |       |||||||| || ||  | ||  ||||||||| ||||||   | |||||||| |||||   |  ||||||||||| ||||| || ||||||||||||||||| ||   
-------------------------------------------------------------tccaaatttatt--tgccccctaaactatggattccttgttatacattcatctgcgttatgttcatgcgatttctgttagtttga-----tgtatttgctgct-------gcagAGGGCGTGCTGTATGCCAAGAAGGACTACAACCTGGCGAAGCACCCGCAGATC---GATGTGCCCAACCTCCAGGTGATCAAGCTCATGCAGAGCTTTAAGTC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22065184|gb|BQ816221.1|BQ816221
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|7545761|gb|AW676249.1|AW676249
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22055366|gb|BQ811781.1|BQ811781
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10791471|gb|AV628837.1|AV628837
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|8400927|gb|BE056561.1|BE056561
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22055736|gb|BQ811996.1|BQ811996
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCTTAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22076840|gb|BQ825616.1|BQ825616
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|7545576|gb|AW676064.1|AW676064
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10790130|gb|AV627496.1|AV627496
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|8932770|gb|BE227531.1|BE227531
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|49461306|gb|BP089219.1|BP089219
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|16072808|gb|BI874804.1|BI874804
EST:     CTTATCCCCAAGAAGAAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: CTTATCCCCAAGAAG-AACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22055379|gb|BQ811789.1|BQ811789
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|9210490|gb|BE337405.1|BE337405
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10126173|gb|BE724877.1|BE724877
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|34986134|gb|CF560051.1|CF560051
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22066556|gb|BQ816995.1|BQ816995
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|15700711|gb|BI725016.1|BI725016
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10191343|gb|BE761419.1|BE761419
EST:     GCTTATCCCCAAGAAGAACCGCAGAGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|16073576|gb|BI875572.1|BI875572
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|49465088|gb|BP093001.1|BP093001
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|6549286|gb|AV395070.1|AV395070
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|8514336|gb|BE122231.1|BE122231
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|7545607|gb|AW676095.1|AW676095
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10785308|gb|AV641980.1|AV641980
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|9210936|gb|BE337851.1|BE337851
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|23363383|gb|BU651203.1|BU651203
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|49458172|gb|BP086085.1|BP086085
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCACGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10768605|gb|AV619430.1|AV619430
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|49458470|gb|BP086383.1|BP086383
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10780524|gb|AV637204.1|AV637204
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|16071848|gb|BI873844.1|BI873844
EST:     CTTATCCCCAAGAAGAACCGCAGGGAGGTGTAC-AGCTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: CTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAG-TACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22057747|gb|BQ812714.1|BQ812714
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|6541375|gb|AV387159.1|AV387159
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|49464566|gb|BP092479.1|BP092479
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAANCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|6542950|gb|AV388734.1|AV388734
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|34991563|gb|CF565480.1|CF565480
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|49463232|gb|BP091145.1|BP091145
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|16073270|gb|BI875266.1|BI875266
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10126446|gb|BE725150.1|BE725150
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22076331|gb|BQ825107.1|BQ825107
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|23363604|gb|BU651424.1|BU651424
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|8287489|gb|BE025048.1|BE025048
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|49465336|gb|BP093249.1|BP093249
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|161799488|gb|FC086075.1|FC086075
EST:     CTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: CTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|49465411|gb|BP093324.1|BP093324
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10769512|gb|AV620337.1|AV620337
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTTAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22072197|gb|BQ821535.1|BQ821535
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGTGAG
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCG-GAG
EST: gi|22052054|gb|BQ810019.1|BQ810019
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|34987192|gb|CF561109.1|CF561109
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22058393|gb|BQ812976.1|BQ812976
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22063538|gb|BQ815269.1|BQ815269
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCTGGAG
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCC-GGAG
EST: gi|15702705|gb|BI727010.1|BI727010
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|23366683|gb|BU654502.1|BU654502
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|15372078|gb|BI531504.1|BI531504
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|23359165|gb|BU646985.1|BU646985
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10770908|gb|AV621731.1|AV621731
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|9459975|gb|BE453002.1|BE453002
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|16073280|gb|BI875276.1|BI875276
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22072326|gb|BQ821664.1|BQ821664
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|6545767|gb|AV391551.1|AV391551
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|6550585|gb|AV396369.1|AV396369
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|49469000|gb|BP096861.1|BP096861
EST:     TTATCCCCAAGAAGAACCGCAGTGGAGGTGTACAAGTACCTCTTCAAGTG                         AGGGTGTCCTTCAGTGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGA
genomic: TTATCCCCAAGAAGAACCGCAG-GGAGGTGTACAAGTACCTCTTCAAG-Ggtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAG-GCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGA
EST: gi|22068106|gb|BQ818056.1|BQ818056
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10782084|gb|AV638764.1|AV638764
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|23363360|gb|BU651180.1|BU651180
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|34988345|gb|CF562262.1|CF562262
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10780637|gb|AV637317.1|AV637317
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGTGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAG
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAG-GCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAG
EST: gi|22051193|gb|BQ809549.1|BQ809549
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10776171|gb|AV632851.1|AV632851
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|34990000|gb|CF563917.1|CF563917
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|7593311|gb|AW707450.1|AW707450
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|49470557|gb|BP098418.1|BP098418
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|10776139|gb|AV632819.1|AV632819
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22053726|gb|BQ810904.1|BQ810904
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|6540776|gb|AV386560.1|AV386560
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22055477|gb|BQ811843.1|BQ811843
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|49463217|gb|BP091130.1|BP091130
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22056585|gb|BQ812368.1|BQ812368
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGATCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|34980695|gb|CF554724.1|CF554724
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|6550833|gb|AV396617.1|AV396617
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22060210|gb|BQ813717.1|BQ813717
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCTAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|161813106|gb|FC104681.1|FC104681
EST:     CTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: CTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22053282|gb|BQ810663.1|BQ810663
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|23367083|gb|BU654902.1|BU654902
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCCCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22055837|gb|BQ812082.1|BQ812082
EST:     GCTTATCCTCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|8576583|gb|BE129220.1|BE129220
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|22052860|gb|BQ810443.1|BQ810443
EST:     GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: GCTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
EST: gi|161813107|gb|FC104682.1|FC104682
EST:     CTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGG                         AGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA
genomic: CTTATCCCCAAGAAGAACCGCAGGGAGGTGTACAAGTACCTCTTCAAGGgtgagcatca ... gtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aatttatttccccaatgtatgcttacacacctgtatttgctcgttgtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGATCCCCGGCGTGCCCAACCTGCAGGTCATTAAGCTCATGCAGAGCTTCAA
                   tgcttac  putative branch site (score: 2)
             aatgtat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgagcatcagttggtatgcgacctcggtgttcgcgttctttgaggcccggggacatggacgccgggcctagcgacgcttgtcggcgcacagcctgcggcgcgcgctttcttcggccgcaaatttatttccccaatgtatgcttacacacctgtatttgctcgttgtgcgcgcagAGGGTGTCCTTCAGGCGGAGAAGGACTTCAACCTCAAGGAGCACCCGGAGATCCCCGGCGTGCCCAACCTGCAGGTCATTAAGCTCATGCAGAGCTTCAA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT