1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtgttgatctcatcactttttcccaatcatcaaattacctaatcttatttaacaaataatctctacttgaatttccctgcagGGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTACCACACATTCAGCGCAG
species | Arabidopsis thaliana |
transcript | AT5G03880.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAG GGTTCTCCGTTTTGTAAGCTTGTAEST: gi|116475228|gb|EG517820.1|EG517820
genomic: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAGgtgttgatct ... ttccctgcagGGTTCTCCGTTTTGTAAGCTTGTA
EST: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAG GGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTAEST: gi|124938018|gb|EL014690.1|EL014690
genomic: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAGgtgttgatct ... ttccctgcagGGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTA
EST: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAG GGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTAEST: gi|116475229|gb|EG517821.1|EG517821
genomic: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAGgtgttgatct ... ttccctgcagGGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTA
EST: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAG GGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTAEST: gi|125030829|gb|EL103098.1|EL103098
genomic: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAGgtgttgatct ... ttccctgcagGGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTA
EST: ACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAG GGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTEST: gi|86080278|gb|DR376035.1|DR376035
genomic: ACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAGgtgttgatct ... ttccctgcagGGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCT
EST: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAG GGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTAEST: gi|125303306|gb|EL317391.1|EL317391
genomic: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAGgtgttgatct ... ttccctgcagGGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTA
EST: ACTCGAATTCTAGGCATATGAG GGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTAEST: gi|124747894|gb|EH838024.1|EH838024
genomic: ACTCGAATTCTGGGCATATGAGgtgttgatct ... ttccctgcagGGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTA
EST: CTACCACCTAAGCCACTCGAATTCTGGGCATATGAG GGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTAEST: gi|116483992|gb|EG526584.1|EG526584
genomic: CTACCACCTAAGCCACTCGAATTCTGGGCATATGAGgtgttgatct ... ttccctgcagGGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTA
EST: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAG GGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTAEST: gi|124733034|gb|EH824436.1|EH824436
genomic: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAGgtgttgatct ... ttccctgcagGGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTA
EST: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAG GGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTA
genomic: ACACACCAGCGAAACTACCACCTAAGCCACTCGAATTCTGGGCATATGAGgtgttgatct ... ttccctgcagGGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTA
catcaaattacctaatcttatttaacaaataatctctacttgaatttccctgcagGGTTCTCCGTTTTGTAAGCTTGTACGCGAAGTTCTTGTAGAACTGGAGTTACCACACATTCAGCGCAG
atttaac putative branch site (score: 3)
tttccctgc putative PPT
aattacctaatcttat TA-rich tract