1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaacgaacccttctcttataacagaaatttggatactcttttgggaatctctgatcataagaatctaaccattggcagGACCTTTTCACTGGAGGCTTCTCATTTGCCCCTCAGCAAGTTCATGGTCAACATCATGGCATGGGATATGGCATGCAATATTATCAATATCCTGTG
species | Arabidopsis thaliana |
transcript | AT4G32630.2 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: ATCATCAAGATGATGAGACACAATCTAGCATAAGAAAGGCGCTTCCTGAG GACCTTTTCACTGGAGGCTTCTCATTTGCCCCTCAGCAAGTTCATGGTCAAEST: gi|116405913|gb|EG448505.1|EG448505
genomic: ATCATCAAGATGATGAGACACAATCTAGCATAAGAAAGGCGCTTCCTGAGgtaacgaacc ... ccattggcagGACCTTTTCACTGGAGGCTTCTCATTTGCCCCTCAGCAAGTTCATGGTCAA
EST: ATCATCAAGATGATGAGACACAATCTAGCATAAGAAAGGCGCTTCCTGAG GACCTTTTCACTGGAGGCTTCTCATTTGCCCCTCAGCAAGTTCATGGTCAAEST: gi|116405920|gb|EG448512.1|EG448512
genomic: ATCATCAAGATGATGAGACACAATCTAGCATAAGAAAGGCGCTTCCTGAGgtaacgaacc ... ccattggcagGACCTTTTCACTGGAGGCTTCTCATTTGCCCCTCAGCAAGTTCATGGTCAA
EST: ATCATCAAGATGATGAGACACAATCTAGCATAAGAAAGGCGCTTCCTGAG GACCTTTTCACCGGAG-CTTCTCATTTGCCCCTCAGCAAGTTCATGGTCAA
genomic: ATCATCAAGATGATGAGACACAATCTAGCATAAGAAAGGCGCTTCCTGAGgtaacgaacc ... ccattggcagGACCTTTTCACTGGAGGCTTCTCATTTGCCCCTCAGCAAGTTCATGGTCAA
gaaatttggatactcttttgggaatctctgatcataagaatctaaccattggcagGACCTTTTCACTGGAGGCTTCTCATTTGCCCCTCAGCAAGTTCATGGTCAACATCATGGCATGGGATATGGCATGCAATATTATCAATATCCTGTG
atctaac putative branch site (score: 2)
ataagaat TA-rich tract