1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtttgttcttttccagtttgtgtttagtgtttgttcacctgtaaagacggatataaagtatgacacacgccagaaaacacgtaactgtatttatttctctatgccaggtaaattaatttctgtcgtgtctaacagGTATCTTGATTGAGAATATGAGGCGGGAAGGTTTTGAGCTCTCAGTCTCACCACCTAAAGTCAT
species | Arabidopsis thaliana |
transcript | AT2G31060.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: AGGCTTGTCAGAGTCATATGAAGTCCAAGGGAGAGGAGAACTTCAACTTG GTATCTTGATTGAGAATATGAGGCGGGAAGGTTTTGAGCTCTCAGTCTCACEST: gi|125094792|gb|EL152167.1|EL152167
genomic: AGGCTTGTCAGAGTCATATGAAGTCCAAGGGAGAGGAGAACTTCAACTTGgtttgttctt ... tgtctaacagGTATCTTGATTGAGAATATGAGGCGGGAAGGTTTTGAGCTCTCAGTCTCAC
EST: TATGAAGTCCAAGGGAGAGGAGAACTTCAACTTG GTATCTTGATTGAGAATATGAGGCGGGAAGGTTTTGAGCT
genomic: TATGAAGTCCAAGGGAGAGGAGAACTTCAACTTGgtttgttctt ... tgtctaacagGTATCTTGATTGAGAATATGAGGCGGGAAGGTTTTGAGCT
gtaactgtatttatttctctatgccaggtaaattaatttctgtcgtgtctaacagGTATCTTGATTGAGAATATGAGGCGGGAAGGTTTTGAGCTCTCAGTCTCACCACCTAAAGTCAT
aattaat putative branch site (score: 3)
tatttatttctctat TA-rich tract