1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtgagaagagcgctagaccttgatagacattttcctttggaaatcttgtgagtttttgttaacttggtactgtgatttactttatttgcagAGGGACTGATATGCCCAGCCCCCATGGAGTCCCTATTGATCTATTAGATCGATTGGTTATCATCCGGACTCAAATCTATGATCCCTCTGAAATGATCCAG
species | Arabidopsis thaliana |
transcript | AT5G22330.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TTATCTCCGATAGTGATATTTGCAACAAATAGAGGTGTTTGCAACGTAAG AGGGACTGATATGCCCAGCCCCCATGGAGTCCCTATTGATCTATTAGATCGEST: gi|164033842|gb|ES152958.1|ES152958
genomic: TTATCTCCGATAGTGATATTTGCAACAAATAGAGGTGTTTGCAACGTAAGgtgagaagag ... ttatttgcagAGGGACTGATATGCCCAGCCCCCATGGAGTCCCTATTGATCTATTAGATCG
EST: TGTTTGCAACGTAAG AGGGACTGATATGTCCCAGTCCCCATGGAGTCCCTATTGATCTATTAGATC
genomic: TGTTTGCAACGTAAGgtgagaagag ... ttatttgcagAGGGACTGATATG-CCCAGCCCCCATGGAGTCCCTATTGATCTATTAGATC
ttggaaatcttgtgagtttttgttaacttggtactgtgatttactttatttgcagAGGGACTGATATGCCCAGCCCCCATGGAGTCCCTATTGATCTATTAGATCGATTGGTTATCATCCGGACTCAAATCTATGATCCCTCTGAAATGATCCAG
tgttaac putative branch site (score: 2)
tttacttt putative PPT
tgatttactttattt TA-rich tract