1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtgatcagaggacaattgttaccatatagttaatttacatactcttgagttaaataagggatatgactatcctcctagttgacatacaatagttgtttatgctatttgttctttgtggcaattccttttacagGTGGCAGATGGTCTTGTCTTAGAGAAGACCTCATCACCATTAGGCGTACTTCTGATTGTTTTTGAATCCCGACCTGATGCACTTGTACAG
species | Arabidopsis thaliana |
transcript | AT2G39800.2 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: AGCTAGCTGATATGGAAGATCCAATCGGCCGTGTTTTAAAGAAAACAGAG GTGGCAGATGGTCTTGTCTTAGAGAAGACCTCATCACCATTAGGCGTACTTEST: gi|86042494|gb|DR338249.1|DR338249
genomic: AGCTAGCTGATATGGAAGATCCAATCGGCCGTGTTTTAAAGAAAACAGAGgtgatcagag ... ccttttacagGTGGCAGATGGTCTTGTCTTAGAGAAGACCTCATCACCATTAGGCGTACTT
EST: AGCTAGCTGATATGGAAGATCCAATCGGCCGTGTTTTAAAGAAAACAGAG GTGGCAGATGGTCTTGTCTTANAGAANACCTCATCACCATTAGGCGTACTT
genomic: AGCTAGCTGATATGGAAGATCCAATCGGCCGTGTTTTAAAGAAAACAGAGgtgatcagag ... ccttttacagGTGGCAGATGGTCTTGTCTTAGAGAAGACCTCATCACCATTAGGCGTACTT
ttgacatacaatagttgtttatgctatttgttctttgtggcaattccttttacagGTGGCAGATGGTCTTGTCTTAGAGAAGACCTCATCACCATTAGGCGTACTTCTGATTGTTTTTGAATCCCGACCTGATGCACTTGTACAG
agttgac putative branch site (score: 4)
ttccttttac putative PPT
atacaata TA-rich tract