1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtatgtctttaaagtttctttcattcgtaaaaattattatttcgcggtgacatgtaaagattgttggttaaatttatacctttaaatttttaatctcctgcagATATTTGGGGAGGATTTCCTGAACGACAAGTTAAAGCCTTTCTATAAGTCAGACCCCATTCCTGAAAAG
species | Arabidopsis thaliana |
transcript | AT5G60640.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: ACTTTTTCGATGGCGAGATCCAGTCAGATAAAATTAAG ATATTTGGGGAGGATTTCCTGAACGACAAGTTAAAGCCTTTCTATAAGTCAEST: gi|125165477|gb|EL191743.1|EL191743
genomic: ACTTTTTCGATGGCGAGATCCAGTCAGATAAAATTAAGgtatgtcttt ... tctcctgcagATATTTGGGGAGGATTTCCTGAACGACAAGTTAAAGCCTTTCTATAAGTCA
EST: CAGATAAAATTAAG ATATTTGGGGAGGATTTCCTGAACGACAAGTTAAAGCCTTTCTATAAGTCAEST: gi|86064530|gb|DR360287.1|DR360287
genomic: CAGATAAAATTAAGgtatgtcttt ... tctcctgcagATATTTGGGGAGGATTTCCTGAACGACAAGTTAAAGCCTTTCTATAAGTCA
EST: ACCCTAAAAAATACTTTTTCGATGGCGAGATCCAGTCAGATAAAATTAAG ATATTTGGGGA
genomic: ACCCTAAAAAATACTTTTTCGATGGCGAGATCCAGTCAGATAAAATTAAGgtatgtcttt ... tctcctgcagATATTTGGGGA
gacatgtaaagattgttggttaaatttatacctttaaatttttaatctcctgcagATATTTGGGGAGGATTTCCTGAACGACAAGTTAAAGCCTTTCTATAAGTCAGACCCCATTCCTGAAAAG
ttttaat putative branch site (score: 3)
tctcctgc CT-rich tract
attgttggttaaattt TA-rich tract