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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgcggttttctctctggttctttgatctaacctttgtcttctttttactgtcatctcttaacttataattggttttcaccattgcagACATTTCTGGCAAATGGGATTCCACAGAACAATGGGAAGCGATTTTTACTACTCTCCAAG

Basic information

species Arabidopsis thaliana
transcript AT2G23700.1
intron # 7
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttgtcttctttttactgtcatctcttaacttataattggttttcaccattgcagACATTTCTGGCAAATGGGATTCCACAGAACAATGGGAAGCGATTTTTACTACTCTCCAAG
                       tcttaac  putative branch site (score: 2)
                                        ttttcacc  putative PPT
                       tcttaacttataatt  TA-rich tract