1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtacttgtctttaagacttttttaaaaaacattttaccaaaaaaagtttctaggtctgccttatttttctaataattgaaataagatttgtcatcttctttgtggcagGGTCGTAACATATATGACGGGTGTTGTCAGTTGGATATCCAGTTCTCAAA
species | Arabidopsis thaliana |
transcript | AT1G43190.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GGTACAACAGTGTGCTGCCTCTGCTAGAACTGCNCTACAG GGTCGTAACATATATGACGGGTGTTGTCAGTTGGATATCCAGTTCTCAAACEST: gi|164033136|gb|ES106332.1|ES106332
genomic: GGTACAACAGTGTGCTGCCTCTGCTAGAACTGCTCTACAGgtacttgtct ... tttgtggcagGGTCGTAACATATATGACGGGTGTTGTCAGTTGGATATCCAGTTCTCAAAC
EST: GGTACAACAGTGTGCTGCCTCTGCTAGAACTGCTCTACAG GGTCGTAACATATATGACGGGTGTTGTCAGTTGGATATCCAGTTCTCAAAC
genomic: GGTACAACAGTGTGCTGCCTCTGCTAGAACTGCTCTACAGgtacttgtct ... tttgtggcagGGTCGTAACATATATGACGGGTGTTGTCAGTTGGATATCCAGTTCTCAAAC
gtctgccttatttttctaataattgaaataagatttgtcatcttctttgtggcagGGTCGTAACATATATGACGGGTGTTGTCAGTTGGATATCCAGTTCTCAAA
ttctaat putative branch site (score: 2)
tttgtcatcttcttt putative PPT
ttatttttctaataat TA-rich tract