1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtttgtctttcctaaaaaacgtggtagcttataatgtagctttacatttcacttagccttaatttaactctttaaagttcatagcgaattagtattttcatctccttacgtgtgatcagGTGGTACATATATCAGCCATAGGAGAGACAGTAGCAACTGATGCCACAGGAGCCGGTGACCTATTCGCAAGCGGGTTTCTGTACGGACTAATAAAGGGAT
species | Arabidopsis thaliana |
transcript | AT1G19600.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: CTGTGGTAACTTTAGGGTCGAAAGGGTGCATTGCAAAACATGATAAAGAG GTGGTATATATATCAGCCATAGGAGAGACAGTAGCAACTGATGCCACAGGA
genomic: CTGTGGTAACTTTAGGGTCGAAAGGGTGCATTGCAAAACATGATAAAGAGgtttgtcttt ... gtgtgatcagGTGGTACATATATCAGCCATAGGAGAGACAGTAGCAACTGATGCCACAGGA
taactctttaaagttcatagcgaattagtattttcatctccttacgtgtgatcagGTGGTACATATATCAGCCATAGGAGAGACAGTAGCAACTGATGCCACAGGAGCCGGTGACCTATTCGCAAGCGGGTTTCTGTACGGACTAATAAAGGGAT
tccttac putative branch site (score: 2)
aattagtattttcat TA-rich tract