1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaataacttggtaaagtaaattggctccaccctattatattaagtacttgtttgatccttcaggcaagtattgacagttttttcacctttcttcctgacattctatagCACACTAAAGTTAGAGGCGCATACTGCCTTGGAATCTTTCCTGATAGGGATTCAACAACACTCCTAGGAG
species | Arabidopsis thaliana |
transcript | AT5G43100.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TTGGAAATGGTCAGAAACTGATTCTTTCTCCCGAGAACTACTTATTCAGG CACACTAAAGTTAGAGGCGCATACTGCCTTGGAATCTTTCCTGATAGGGAT
genomic: TTGGAAATGGTCAGAAACTGATTCTTTCTCCCGAGAACTACTTATTCAGGgtaataactt ... cattctatagCACACTAAAGTTAGAGGCGCATACTGCCTTGGAATCTTTCCTGATAGGGAT
gatccttcaggcaagtattgacagttttttcacctttcttcctgacattctatagCACACTAAAGTTAGAGGCGCATACTGCCTTGGAATCTTTCCTGATAGGGATTCAACAACACTCCTAGGAG
tcctgac putative branch site (score: 2)
ttttttcacctttctt CT-rich tract
agtttttt TA-rich tract