1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtccaagaacaatcactttcttctcttttcatatactcgattgattgttctcatagcatcttatattttcttttgtttcctcctttcctagTACTCCCATCATTCTCAGGCAATGTTCCATCAGCTTTGAGAAAGATATATCCTGAGGCAAATATAACTCGACTTGATAACTG
species | Arabidopsis thaliana |
transcript | AT5G13690.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TTTGCAGAAACAGATACTTTCTCGGATGTTGAAGTTTGGCATGACTCCAG TACTCCCATCATTC
genomic: TTTGCAGAAACAGATACTTTCTCGGATGTTGAAGTTTGGCATGACTCCAGgtccaagaac ... cctttcctagTACTCCCATCATTC
tcgattgattgttctcatagcatcttatattttcttttgtttcctcctttcctagTACTCCCATCATTCTCAGGCAATGTTCCATCAGCTTTGAGAAAGATATATCCTGAGGCAAATATAACTCGACTTGATAACTG
gattgat putative branch site (score: 4)
catcttatattttctt putative PPT
atcttatattttcttt TA-rich tract