1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaaagcttctttatttttcatcttttttttaccatctaactgttagaatcaagcaagtagagcaaactctttgaacttggatactgctaagtcctctgattcatggtgttttaaatttaaacaatgacagCAACTTGAAGGCATGGTTGAGTTTATTGGATTGTTGAAGGTGACTATTAAAAAGGGTACCAATATGGCCATCCGAGATATGATGTCAAGTGATCCCTATG
species | Arabidopsis thaliana |
transcript | AT4G21160.3 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CTAAAAAGATTGTTGATAGCTTTCGCACTAATTCATCATCGCAACAGCCG CAACTTGAAGGCATGGTTGAGTTTATTGG
genomic: CTAAAAAGATTGTTGATAGCTTTCGCACTAATTCATCATCGCAACAGCCGgtaaagcttc ... acaatgacagCAACTTGAAGGCATGGTTGAGTTTATTGG
cttggatactgctaagtcctctgattcatggtgttttaaatttaaacaatgacagCAACTTGAAGGCATGGTTGAGTTTATTGGATTGTTGAAGGTGACTATTAAAAAGGGTACCAATATGGCCATCCGAGATATGATGTCAAGTGATCCCTATG
ctctgat putative branch site (score: 4)
tgttttaaatttaaac TA-rich tract