1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtacaatgtcctgggttttccccttttgtttgttctcttatgcaaacaatgggatatataatcaagcaagaaattctgttattttacgagaaataaattctgatattttacagGAAAGAATATGTCGATAACTTCATGATCAATGCCTCGGCTTAGAGAGCTTCCTCTCTCTATATCTGGCTTTCTGAAACAAGGATCTATAAACAAGGCCTA
species | Arabidopsis thaliana |
transcript | AT4G14716.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: ACACGACCATCTTCCTGCAAG GAAAGAATATGTCGATAACTTCATGGTCAATGCCTCTGCTTAGAGAGCTTCEST: gi|116403021|gb|EG445613.1|EG445613
genomic: ACACGACCATCTTCCTGCAAGgtacaatgtc ... tattttacagGAAAGAATATGTCGATAACTTCATGATCAATGCCTCGGCTTAGAGAGCTTC
EST: GAACCGGTATGGACACCATACAATCGCCCACACGACCATCTTCCTGCAAG GAAAGAATATGTCGATAACTTCATGATCAATGCCTCGGCTTAGAGAGCTTCEST: gi|125087037|gb|EL146309.1|EL146309
genomic: GAACCGGTATGGACACCATACAATCGCCCACACGACCATCTTCCTGCAAGgtacaatgtc ... tattttacagGAAAGAATATGTCGATAACTTCATGATCAATGCCTCGGCTTAGAGAGCTTC
EST: GAACCGGTATGGACACCATACAATCGCCCACACGACCATCTTCCTGCAAG GAAAGAATATGTCGEST: gi|124916606|gb|EH990480.1|EH990480
genomic: GAACCGGTATGGACACCATACAATCGCCCACACGACCATCTTCCTGCAAGgtacaatgtc ... tattttacagGAAAGAATATGTCG
EST: GAACCGGTATGGACACCATACAATCGCCCACACGACCATCTTCCTGCAAG GAAAGAATATGTCGATAACTTEST: gi|125022400|gb|EL094669.1|EL094669
genomic: GAACCGGTATGGACACCATACAATCGCCCACACGACCATCTTCCTGCAAGgtacaatgtc ... tattttacagGAAAGAATATGTCGATAACTT
EST: GAACCGGTATGGACACCATACAATCGCCCACACGACCATCTTCCTGCAAG GAAAGAATATGTCGATAEST: gi|19741175|gb|AU226528.1|AU226528
genomic: GAACCGGTATGGACACCATACAATCGCCCACACGACCATCTTCCTGCAAGgtacaatgtc ... tattttacagGAAAGAATATGTCGATA
EST: GAACCGGTATGGACACCATACAATCGCCCACACGACCATCTTCCTGCAAG GAAAGAATATGGTCGATAACTTCATGATCAATGCCTCGGCTTAGAGAGCTT
genomic: GAACCGGTATGGACACCATACAATCGCCCACACGACCATCTTCCTGCAAGgtacaatgtc ... tattttacagGAAAGAATAT-GTCGATAACTTCATGATCAATGCCTCGGCTTAGAGAGCTT
taatcaagcaagaaattctgttattttacgagaaataaattctgatattttacagGAAAGAATATGTCGATAACTTCATGATCAATGCCTCGGCTTAGAGAGCTTCCTCTCTCTATATCTGGCTTTCTGAAACAAGGATCTATAAACAAGGCCTA
ttctgat putative branch site (score: 3)
agaaataaattctgat TA-rich tract