1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaagtcttataatcgtattaatgaacatttgaagtacgtggatcgtttaatttgctcacagaatatattgtagcagGAACGACGAGCCACGAGGGAGCATGCAAGCCGCGATTTTAACCAGCCACGGACTGAAATTTCACCGGCTGTGGCTGAGACGAGCGAAAGTGACAGTTCAA
species | Arabidopsis thaliana |
transcript | AT4G01330.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GGGTCATATTTATACACATGCTTGAAGCTGAAGACTTGTTCTATCGTGAC GAACGACGAGCCACGAGGGAGCATGEST: gi|125218758|gb|EL232841.1|EL232841
genomic: GGGTCATA-TTATACACATGCTTGAAGCTGAAGACTTGTTCTATCGTGACgtaagtctta ... attgtagcagGAACGACGAGCCACGAGGGAGCATG
EST: ACTTGTTCTATCGTGAC GAACGACGAGCCACGAGGGAGCATGCAAGCCGCGATTTTAACCAGCCACGG
genomic: ACTTGTTCTATCGTGACgtaagtctta ... attgtagcagGAACGACGAGCCACGAGGGAGCATGCAAGCCGCGATTTTAACCAGCCACGG
tgaacatttgaagtacgtggatcgtttaatttgctcacagaatatattgtagcagGAACGACGAGCCACGAGGGAGCATGCAAGCCGCGATTTTAACCAGCCACGGACTGAAATTTCACCGGCTGTGGCTGAGACGAGCGAAAGTGACAGTTCAA
tgctcac putative branch site (score: 2)
aatatattgta TA-rich tract