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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttaggatttggttctccacttctcttccttgatcattactatcatacgctgttcctgattttgattcttgtttctgattttctccagATCAATGCTGCAAAATCCAGCGAAGAGGTTTTCGAGGCTGTCAGAGTTCTATTTGCATCTGAAACTTGACAAGGTGATGCTCGTGATCATCCAAACATAC

Basic information

species Arabidopsis thaliana
transcript AT3G60180.2
intron # 6
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcattactatcatacgctgttcctgattttgattcttgtttctgattttctccagATCAATGCTGCAAAATCCAGCGAAGAGGTTTTCGAGGCTGTCAGAGTTCTATTTGCATCTGAAACTTGACAAGGTGATGCTCGTGATCATCCAAACATAC
                                       ttctgat  putative branch site (score: 3)
                                ttcttgtttctgattt  CT-rich tract
                         attttgatt  TA-rich tract