1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaagtggttctcgatgcgcagttgcactgtaacgtgttgcatatggtcatgatttaataggaaaaccaatgctgttttccttacgagagcttgtttcgtttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCGCTGCTACAACCCGCATCATTTATGGAG
species | Arabidopsis thaliana |
transcript | AT3G55440.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116434695|gb|EG477287.1|EG477287
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|86079485|gb|DR375242.1|DR375242
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|125082530|gb|EL143400.1|EL143400
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: CCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116470932|gb|EG513524.1|EG513524
genomic: CCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGGGTGCTGATGTCEST: gi|124856805|gb|EH941242.1|EH941242
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: AAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116434684|gb|EG477276.1|EG477276
genomic: AAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|125044499|gb|EL116768.1|EL116768
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAEST: gi|164159021|gb|ES022732.1|ES022732
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAA
EST: GTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTEST: gi|164193914|gb|ES093030.1|ES093030
genomic: GTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGT
EST: CGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|164099427|gb|ES106520.1|ES106520
genomic: CGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCEST: gi|124737722|gb|EH829124.1|EH829124
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGC
EST: TTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|164025729|gb|ES131683.1|ES131683
genomic: TTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCEST: gi|125005924|gb|EL078193.1|EL078193
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAAGGAAAEST: gi|86078618|gb|DR374375.1|DR374375
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGA-GGAAA
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|124738079|gb|EH829481.1|EH829481
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGEST: gi|164142655|gb|ES018495.1|ES018495
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTG
EST: GCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|164066085|gb|ES135761.1|ES135761
genomic: GCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGEST: gi|164159504|gb|EL985385.1|EL985385
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGG
EST: GCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|124939127|gb|EL015696.1|EL015696
genomic: GCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAEST: gi|124797655|gb|EH887334.1|EH887334
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGA
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGEST: gi|116434506|gb|EG477098.1|EG477098
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGG
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|124930521|gb|EL007962.1|EL007962
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: CCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116434673|gb|EG477265.1|EG477265
genomic: CCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116443935|gb|EG486527.1|EG486527
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|164141527|gb|ES200302.1|ES200302
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGACTGGCCAAGEST: gi|116434661|gb|EG477253.1|EG477253
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGG-CTGGCCAAG
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116434628|gb|EG477220.1|EG477220
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|125238182|gb|EL252267.1|EL252267
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGEST: gi|116443947|gb|EG486539.1|EG486539
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGG
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACGCGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116443934|gb|EG486526.1|EG486526
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|164127437|gb|ES008297.1|ES008297
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: GCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116434739|gb|EG477331.1|EG477331
genomic: GCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116434539|gb|EG477131.1|EG477131
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116470943|gb|EG513535.1|EG513535
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|125192214|gb|EL207168.1|EL207168
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTEST: gi|116483114|gb|EG525706.1|EG525706
genomic: TGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGT
EST: TGTGGGTCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|164148493|gb|ES074251.1|ES074251
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGT-GGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAA-TGGCTGGCCAAGAACGEST: gi|116470942|gb|EG513534.1|EG513534
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACG
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116434639|gb|EG477231.1|EG477231
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116434584|gb|EG477176.1|EG477176
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116434617|gb|EG477209.1|EG477209
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|125145819|gb|EL181016.1|EL181016
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: CATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|124787844|gb|EH877523.1|EH877523
genomic: CATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGEST: gi|124958032|gb|EL032808.1|EL032808
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGG
EST: GCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|116434495|gb|EG477087.1|EG477087
genomic: GCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|125072987|gb|EL137484.1|EL137484
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAEST: gi|116470931|gb|EG513523.1|EG513523
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGA
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGGGTGCTGATGTCEST: gi|116434717|gb|EG477309.1|EG477309
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGTTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCEST: gi|125119985|gb|EL167936.1|EL167936
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGEST: gi|125231741|gb|EL245826.1|EL245826
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGG
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAAEST: gi|116434650|gb|EG477242.1|EG477242
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAA
EST: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAA GTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
genomic: TGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGCTCAAGAAgtaagtggtt ... ttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTC
taataggaaaaccaatgctgttttccttacgagagcttgtttcgtttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCGCTGCTACAACCCGCATCATTTATGGAG
tccttac putative branch site (score: 2)
tttcgttt putative PPT
tttatgaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagtggttctcgatgcgcagttgcactgtaacgtgttgcatatggtcatgatttaataggaaaaccaatgctgttttccttacgagagcttgtttcgtttatgaacagGTACACGATGAGCTGAGGAAATGGCTGGCCAAGAACGTGAGTGCTGATGTCGCTGCTACAACCCGCATCATTTATGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT