1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaacttgtttgatcaaaatcccaagaaagaactctaaatgttaattgtagaaacattttaaacctaatgatgccctttgtaatgtactggcagGCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACATTTCGTCTTGCGGCATCCTTGTGAACCAGAAGAT
species | Arabidopsis thaliana |
transcript | AT2G39690.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: AGTATGGGTTACCATCGTCACACAATAGACTACTTACCTTGATGAACAAG GCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACATEST: gi|116384466|gb|EG427058.1|EG427058
genomic: AGTATGGGTTACCATCGTCACACAATAGACTACTTACCTTGATGAACAAGgtaacttgtt ... gtactggcagGCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACAT
EST: AGTATGGGTTACCATCGTCACACAATAGACTACTTACCTTGATGAACAAG GCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACATEST: gi|116383984|gb|EG426576.1|EG426576
genomic: AGTATGGGTTACCATCGTCACACAATAGACTACTTACCTTGATGAACAAGgtaacttgtt ... gtactggcagGCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACAT
EST: AGTATGGGTTACCATCGTCACACAATAGACTACTTACCTTGATGAACAAG GCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACATEST: gi|116384467|gb|EG427059.1|EG427059
genomic: AGTATGGGTTACCATCGTCACACAATAGACTACTTACCTTGATGAACAAGgtaacttgtt ... gtactggcagGCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACAT
EST: AGTATGGGTTACCATCGTCACACAATAGACTACTTACCTTGATGAACAAG GCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACATEST: gi|116384469|gb|EG427061.1|EG427061
genomic: AGTATGGGTTACCATCGTCACACAATAGACTACTTACCTTGATGAACAAGgtaacttgtt ... gtactggcagGCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACAT
EST: AGTATGGGTTACCATCGTCACACAATAGACTACTTACCTTGATGAACAAG GCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACATEST: gi|116384465|gb|EG427057.1|EG427057
genomic: AGTATGGGTTACCATCGTCACACAATAGACTACTTACCTTGATGAACAAGgtaacttgtt ... gtactggcagGCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACAT
EST: AGTATGGGTTACCATCGTCACACAATAGACTACTTACCTTGATGAACAAG GCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACAT
genomic: AGTATGGGTTACCATCGTCACACAATAGACTACTTACCTTGATGAACAAGgtaacttgtt ... gtactggcagGCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACAT
tgttaattgtagaaacattttaaacctaatgatgccctttgtaatgtactggcagGCTTCACTCAACGTAGGTGGCATAGTCCTCAACGCTTTGGCGATTGAACATTTCGTCTTGCGGCATCCTTGTGAACCAGAAGAT
acctaat putative branch site (score: 3)
tagaaacattttaaa TA-rich tract