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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaaactacggttctatttatcacatttccgaaaccttaatccctccttaatgcatatatattcttttgcacagGTGGGAAATGGAGATATGGACAAGCATTACGACAGATTAGGAGCCGCCATGTATGCGTGGTCACACGCAATGATCTCTGACAAAACTTACAAGTCTATCC

Basic information

species Arabidopsis thaliana
transcript AT2G24010.1
intron # 6
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atcacatttccgaaaccttaatccctccttaatgcatatatattcttttgcacagGTGGGAAATGGAGATATGGACAAGCATTACGACAGATTAGGAGCCGCCATGTATGCGTGGTCACACGCAATGATCTCTGACAAAACTTACAAGTCTATCC
                          ccttaat  putative branch site (score: 4)
                                        tattctttt  putative PPT
                            ttaatgcatatatatt  TA-rich tract