1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gttagtgtttccagagaccttaaaggaacattccctgaactccaaaaactctgcaactcttaagttgaatggaagaaacatatgctaataaagaacattctctctggaaaaattgtttgttcagGAAAGCAACAGATTGGAGTACCTGATACCAAAAAGAACATCGTTGAGACATCGGCTGCCAATGGGAGACCAAGGATTCACAGACTTTGTGGCTCATCTTC
species | Arabidopsis thaliana |
transcript | AT1G73450.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TATGAGCGGAACCAG GAAAGCAACAGATTGGAGTACCTGATACCAAAAAGAACATCGTTGAGACAAEST: gi|125204529|gb|EL219483.1|EL219483
genomic: TATGAGCGGAACCAGgttagtgttt ... gtttgttcagGAAAGCAACAGATTGGAGTACCTGATACCAAAAAGAACATCGTTGAGACA-
EST: TATGAGCGGAACCAG GAAAGCAACAGATTGGAGTACCTGATACCAAAAAGAACATCGTTGAGACATEST: gi|124731801|gb|EH823203.1|EH823203
genomic: TATGAGCGGAACCAGgttagtgttt ... gtttgttcagGAAAGCAACAGATTGGAGTACCTGATACCAAAAAGAACATCGTTGAGACAT
EST: TTCCCACAAATACTTCACAAAAAACCGAATGCTCTATGAGCGGAACCAG GAAAGCAACAGATTGGAGTACCTGATA
genomic: TTCCCACAAATACTTCACAAAAAACCGAATGCTCTATGAGCGGAACCAGgttagtgttt ... gtttgttcagGAAAGCAACAGATTGGAGTACCTGATA
tggaagaaacatatgctaataaagaacattctctctggaaaaattgtttgttcagGAAAGCAACAGATTGGAGTACCTGATACCAAAAAGAACATCGTTGAGACATCGGCTGCCAATGGGAGACCAAGGATTCACAGACTTTGTGGCTCATCTTC
tgctaat putative branch site (score: 2)
tttgttc putative PPT
taataaagaacatt TA-rich tract