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gtaagttcttaactctgttacaaggtcttaagtaaatactaatagacatgccggcacatccatcatgcgttgttttctatctctttgatcagATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATACTCTGGGCTGCCTTGTTTCTTCAGTTCTGGAAACGTAAAAATGCGGCCTTGTTA
species | Arabidopsis thaliana |
transcript | AT1G73020.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TTGATATTTCCAGCCTTACTTGGGTTTATAGTGCAGATGGTTGATTTTGG ATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATAEST: gi|116423940|gb|EG466532.1|EG466532
genomic: TTGATATTTCCAGCCTTACTTGGGTTTATAGTGCAGATGGTTGATTTTGGgtaagttctt ... ctttgatcagATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATA
EST: AGATGGTTGATTTTGG ATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATACTCTGEST: gi|116436360|gb|EG478952.1|EG478952
genomic: AGATGGTTGATTTTGGgtaagttctt ... ctttgatcagATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATACTCTG
EST: TTGATATTTCCAGCCTTACTTGGGTTTATAGTGCAGATGGTTGATTTTGG ATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATACTCTGEST: gi|116436397|gb|EG478989.1|EG478989
genomic: TTGATATTTCCAGCCTTACTTGGGTTTATAGTGCAGATGGTTGATTTTGGgtaagttctt ... ctttgatcagATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATACTCTG
EST: TTGATATTTCCAGCCTTACTTGGGTTTATAGTGCAGATGGTTGATTTTGG ATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATACTCCGEST: gi|116423947|gb|EG466539.1|EG466539
genomic: TTGATATTTCCAGCCTTACTTGGGTTTATAGTGCAGATGGTTGATTTTGGgtaagttctt ... ctttgatcagATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATACTCTG
EST: GTTGATTTTGG ATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATACTCTGEST: gi|116435864|gb|EG478456.1|EG478456
genomic: GTTGATTTTGGgtaagttctt ... ctttgatcagATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATACTCTG
EST: TTGATATTTCCAGCCTTACTTGGGTTTATAGTGCAGATGGTTGATTTTGG ATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATACTCTG
genomic: TTGATATTTCCAGCCTTACTTGGGTTTATAGTGCAGATGGTTGATTTTGGgtaagttctt ... ctttgatcagATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATACTCTG
actaatagacatgccggcacatccatcatgcgttgttttctatctctttgatcagATCCTTGCAGTTTCTTGCTCTCCCAAGTTTCTTTGTGGGCACAATACTCTGGGCTGCCTTGTTTCTTCAGTTCTGGAAACGTAAAAATGCGGCCTTGTTA
tactaat putative branch site (score: 1)
ttgttttctatctctt putative PPT
ttttctat TA-rich tract