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gtaatgctctgtctcaagaggtcttttctgctatgatttaccttctgacatttcatttataagttttattttccgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGTTAGGTGGTACTCTTGTTCCTTACTATCTTGATGAGTCTGAAAACTGGG
species | Arabidopsis thaliana |
transcript | AT1G23310.2 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: NNNGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGTG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGEST: gi|124835509|gb|EH919948.1|EH919948
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGNGATGGG ATTCTAGTTCCGGTTCCACAGTAEST: gi|124968960|gb|EL042886.1|EL042886
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTA
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACEST: gi|116482909|gb|EG525501.1|EG525501
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTAC
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGEST: gi|86074105|gb|DR369862.1|DR369862
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: AGGNGTGATGCAAATCTTGAATTGNGT-ATACGCGGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGAATCCACTTTACTCAGCTACCAEST: gi|116434550|gb|EG477142.1|EG477142
genomic: AGGTGTGATGCAAATCTTGAATTGTGTTATACGCGG-TAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCA
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGEST: gi|124723140|gb|EH814542.1|EH814542
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: ATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTCTACTCAGCTACCATATCACTGEST: gi|125245347|gb|EL259432.1|EL259432
genomic: ATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: CAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGEST: gi|301502125|gb|HO207665.1|HO207665
genomic: CAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGEST: gi|124908559|gb|EH982639.1|EH982639
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCAEST: gi|124704901|gb|EH796303.1|EH796303
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCA
EST: TGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATC-ACTTTACTCAGCTACCATATCACTGEST: gi|124861150|gb|EH945587.1|EH945587
genomic: TGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: GATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCACGCTACCATATCACTEST: gi|164029950|gb|ES005092.1|ES005092
genomic: GATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCA-GCTACCATATCACT
EST: AATCTTGAATTAGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACEST: gi|116434562|gb|EG477154.1|EG477154
genomic: AATCTTGAATT-GTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTAC
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGEST: gi|124899875|gb|EH974493.1|EH974493
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: AAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGEST: gi|125225778|gb|EL239863.1|EL239863
genomic: AAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: TGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATACCACTTTACTCAGCTACCATATCACTEST: gi|125043518|gb|EL115787.1|EL115787
genomic: TGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTAT-CCACTTTACTCAGCTACCATATCACT
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCAEST: gi|116482910|gb|EG525502.1|EG525502
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCA
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGEST: gi|86074110|gb|DR369867.1|DR369867
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGEST: gi|86074123|gb|DR369880.1|DR369880
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAANGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGEST: gi|164063684|gb|EL994602.1|EL994602
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: AATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACEST: gi|125232965|gb|EL247050.1|EL247050
genomic: AATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTAC
EST: AAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTAACTCAGCTACCATATCACTEST: gi|86074134|gb|DR369891.1|DR369891
genomic: AAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTA-CTCAGCTACCATATCACT
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGEST: gi|124832595|gb|EH917034.1|EH917034
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTG
EST: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCAEST: gi|86074106|gb|DR369863.1|DR369863
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCA
EST: NNGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGG ATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATC
genomic: AAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGAGATGGGgtaatgctct ... cgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATC
tgctatgatttaccttctgacatttcatttataagttttattttccgtttggcagATTCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGTTAGGTGGTACTCTTGTTCCTTACTATCTTGATGAGTCTGAAAACTGGG
ttctgac putative branch site (score: 2)
ttttattttccgttt putative PPT
tgacatttcatttata TA-rich tract