1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtacacacttaagaagagtgtgttgatttcatattatgcaaaggaccaaaatactgtcggtgtttgctaagcttacctataaatctacacgtagGAATTATCATCAGACTCTTCTCAGCACGTCAGATCTGCATTGGCATCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAG
species | Arabidopsis thaliana |
transcript | AT1G13320.2 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TATCCAGCACATTCTTCCCTGTGTAAAG GAATTATCATCAGACTCTTCTCAGCACGTCAGATEST: gi|116425646|gb|EG468238.1|EG468238
genomic: TATCCAGCACATTCTTCCCTGTGTAAAGgtacacactt ... ctacacgtagGAATTATCATCAGACTCTTCTCAGCACGTCAGAT
EST: GCATTTTAAACCCTGAACTCGCTATCCAGCACATTCTTCCCTGTGTAAAG GAATTATCATCEST: gi|116425639|gb|EG468231.1|EG468231
genomic: GCATTTTAAACCCTGAACTCGCTATCCAGCACATTCTTCCCTGTGTAAAGgtacacactt ... ctacacgtagGAATTATCATC
EST: GCATTTTAAACCCTGAACTCGCTATCCAGCACATTCTTCCCTGTGTAAAG GAATTATCATCAGACTCTTCTCAGCACGTCAGATCTGCATTGGCATCAGTT
genomic: GCATTTTAAACCCTGAACTCGCTATCCAGCACATTCTTCCCTGTGTAAAGgtacacactt ... ctacacgtagGAATTATCATCAGACTCTTCTCAGCACGTCAGATCTGCATTGGCATCAGTT
aaaggaccaaaatactgtcggtgtttgctaagcttacctataaatctacacgtagGAATTATCATCAGACTCTTCTCAGCACGTCAGATCTGCATTGGCATCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAG
agcttac putative branch site (score: 3)
tataaatcta TA-rich tract