Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtcagttcttcacagtggaaacctgtttcttgaatcacattctacctagtgagatcttgtgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC

Basic information

species Arabidopsis thaliana
transcript AT5G35530.1
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: LOC_Os07g41750.1 (Oryza sativa), 3'ss of exon 5
gtcagttcttcacagtggaaacctgtttcttgaatcacattctac------ctagtgagatcttgtgtaacct-----gaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
      | |  ||| |  || ||      |||||| | ||  | |      || |||| | ||||  |    |     ||| ||| ||   |   | | ||||||||||| ||| | ||||| ||||| |||||||| ||||| || |||||||| |||||||| ||||| || || || ||| |||| | ||||||| | |
-----gtttgtaca-taaaatccatccgtttgaataaaatgttgctgtctccttgtgatagcttgaatttttttcttagaagctgctt---cttgttttcagGGTGTGCTGGGTATTAAGGTCAAGATTATGCTTGATTGGGATCCGAAGGGCAAGCAAGGACCAATGACTCCTTTACCGGATCTTGTTACCATCCATGCCC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: GRMZM2G093902_T02 (Zea mays), 3'ss of exon 5
-gtcagttcttcacagtggaaacctgtttcttgaatcacattctacctagtgagatcttgtgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
  |  || |||   |   ||       || ||     |   | || | |   || | ||  ||||    | ||| ||| |       | ||||||||||||||| ||||||| ||||| ||||| |||||||| || |||||||| ||||| || |  |  || || |||||| | || |  || ||    |
gtttggtgcttggtatcagatgttatcttattatgcaaacatataacaaaatagctgtta-gtaat---actctagttgacttggctt-cagGGTGTGCTTGGTATCAAGGTTAAGATTATGCTGGACTGGGATCCAAAGGGCAAGCAAGGGCCAACCATGCCTTTACCTGATTTGGTTACAATTCACGTGC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: GLYMA16G33230.1 (Glycine max), 3'ss of exon 5
------------------------------gtcagttcttcacagtggaaacctgttt---cttgaatcacattctaccta-gtgagatcttgtgtaacctgaatctggt---taatcacatg---tgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                              ||   |  ||| |       |  |   |    |||  |||  |||||  |   |   | | || | ||  ||   ||  |   || |  | ||   | |||||||| |||||| ||||||| |||||||||||||| ||||| || || || ||||| || || |  || ||  | |||||| |||| |  ||||| || |
gtttgcttctatttctcatattacatgatagtttttctttcgccactaggattttcatgcatttggctcattttctatttttatttcaacatg-gaaagttggtgctaatcactattttcctgtcttacagGGTGTTCTTGGTATCAAGGTTAAGATCATGCTTGATTGGGATCCTAAAGGGAAACAGGGTCCTAAAACTCCCCTTCCTGATCTTGTCACAATCCACACTC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: GLYMA09G28440.1 (Glycine max), 3'ss of exon 5
----------------------------------------gtcagttcttcacagtggaaacctgtt--tcttgaatcacattctacct-agtga---gatcttg-----tgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                                         |    | |   || | | |   |  |  | |||  |||  || |  || | ||    ||| |||     || ||   || | |  || ||      |  ||||||| |||||| ||||||| |||||||||||||| ||||| || || || ||||| || || |  || ||  | |||||| |||| |  ||||| || |
gtttgttttttttttttttttctacatagccacctgattgattttctttcagcactaggattttcatgttgttggctcattttttttcttaatggattgatgttgctaaatgcaaaaagatttttcttcattgtcc-tatagGGTGTTCTTGGTATCAAGGTTAAGATCATGCTTGATTGGGATCCTAAAGGGAAACAGGGTCCTAAAACTCCCCTTCCTGATCTTGTCACGATCCACACTC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: GLYMA16G33240.1 (Glycine max), 3'ss of exon 5
--------------------------------gtcagttcttc--acagtggaaacctgt--ttcttgaatcacattctacct---------agtgagatcttgtgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                                |  | |||||    || | | |   |    || |||  |||  ||||  ||           ||        ||  |  ||| ||       ||  || |  ||||||| |||||| ||||||| |||||||||||||| ||||| || || || ||||| || || |  || ||  | |||||| |||| |  ||||| || |
gtttgattttttattcttcatagttaactgatggaatttcttttagcactaggattttcatgttgttggctcattttctttcttcatggattgatggtgctaaatgctaattgattccttactgtcttatatatagGGTGTTCTTGGTATCAAGGTTAAGATCATGCTTGATTGGGATCCTAAAGGGAAACAGGGTCCTAAAACTCCCCTTCCTGATCTTGTCACGATCCACACCC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: GLYMA10G26790.1 (Glycine max), 3'ss of exon 5
-------------------gtcagttcttcacagtggaaacctgtttcttgaatcacattctacc-tagtgagatcttgtgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                   ||   ||||| | | |    | || |||   |      ||| |||  |   | |||  ||  |||     || |  ||     | |    ||||||| |||||  | |||||||||||||||||||| ||||| || ||||| ||||| || || |  || ||  | |||||| |||| |  |||||| | |
gtttttgcttctattctttgtagattcttgatactatttatctcttttgggttgttgattttactatgaagtgatgatgc-taattgttattt--tttgctgcct-catagGGTGTTCTTGGCATTAAGGTGAAGATCATGCTTGATTGGGATCCTAAGGGGAAACAGGGTCCTAAAACTCCCCTCCCTGATCTTGTCACAATCCATTCTC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: GLYMA10G26890.1 (Glycine max), 3'ss of exon 5
----------------------gtcagttcttcacagtggaaacctgtttcttgaatcacattctacc-tagtgagatcttgtgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                      ||   ||||| | | |    | || |||   |      ||| |||  |    ||||  ||  |||   | || | |||  |  |   |  ||||||| |||||  | |||||||||||||||||||| ||||| || ||||| ||||| || || |  || ||  | |||||| |||| |  |||||| | |
gtttttttatcttctattctttgtagattcttgatactatttatctcttttgggttgttgattttactatgaaaagatgatgc-taattggtattttgttgctgcctcat--agGGTGTTCTTGGCATTAAGGTGAAGATCATGCTTGATTGGGATCCTAAGGGGAAACAGGGTCCTAAAACTCCCCTCCCTGATCTTGTCACAATCCATTCTC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: GLYMA20G21190.1 (Glycine max), 3'ss of exon 5
---------------------gtcagttcttcacagtggaaacctgtttc------ttgaatcac---attctacc-tagtgagatcttgtgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                      |   ||||| | | |    | |  |||       |||| |||     || |||  |   |||||  ||  |||     || | |||  |  |   |  ||||||| |||||  | |||||||||||||||||||| ||||| || ||||| ||||| || || |  || ||  | |||||| |||| |  |||||| | |
gttattttgcttctattcttcatacattcttgatactatttatcatttttgggttgttgattcattttgttttacgatgaagagatgatgc-taattgttattttgttgctgcctcat--agGGTGTTCTTGGCATTAAGGTGAAGATCATGCTTGATTGGGATCCTAAGGGGAAACAGGGTCCTAAAACTCCCCTCCCTGATCTTGTCACAATCCATTCTC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: Vv11s0016g01380.t01 (Vitis vinifera), 3'ss of exon 5
-----------------------------------gtcagttcttcacagtggaaacctgtttcttgaatcacat-----tctacct--agtgagatcttgtg-taacctgaatctgg-ttaatcaca--tgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                                        || || |||     ||||  |    ||  ||| |        |||||  | ||  ||  |||  | | |    ||||| ||  |  |       |||||||| |||||| ||||||| |||||||||||||| ||||| |||||||| || ||||| || |  || ||  | |||||| |||| | |||||| || |
gtttgcttcactcacccagttgatctgttcatgcttctttttgttaacatcctcaaccattgcggtggttcatacggttgcttaccttcattgcaattgtgtcctgatcatgttctggattgcttgccatcaaacagGGTGTACTTGGTATCAAGGTCAAGATCATGCTTGATTGGGATCCCAAGGGAAAGCAAGGCCCCAAAACGCCTCTCCCTGATCTTGTCACCATCCACACTC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: PP1S454_3V6.1 (Physcomitrella patens), 3'ss of exon 5
--------------------------------------------------------gtcagttcttcacagtgga--aacctgtttcttgaatcacattctacct--agtgagatcttgtgtaacctgaatctggttaatcacatgtgc-agGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                                                         |    |  |   |    |   |  | | ||   | |    |  | | |  |||  |   ||||| |||   |     | || |    | | | |||| ||  | ||| ||||||| ||||||||||| |||||||| ||||||||||| |||||||| ||||| ||| | || ||||| || | ||||||||  |
gtatgttacatatccttggccatttctctgttaactgagtttttctggctcttcccttatacttcttgtatcaaattgagttatctcagcatttcggtaatgctttcagtttgccgttgtgaaactgaatcgaagatattgctgtcttctagGGAGTTTTGGGTATCAAGGTCAAGATCATGCTCGACTGGGATCCCAAGGGCAAGCAAGGACCTATGACTCCACTTCCAGATGTGGTCACCATCCATATGC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: PP1S41_146V6.1 (Physcomitrella patens), 3'ss of exon 5
---------------------------------------------gtcagttcttcacagtggaaacctgtttcttgaatcacattctacct---agtgagatcttgtgtaacctgaatctggttaatcacatgtg-cagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                                             |    ||  ||  |   |     |||||     |  | ||      |   |||    | |  |||| | |  |  || ||  | |  | |  ||||||||  | ||| |||| || ||||||||||| ||||||||||| |||||||| |||||||| ||||| ||  | || ||||| || | ||||||||  |
gtttgtcgagcagctattcagtggtgtcctctctgtggtctccttgctgatttctcctac--ggtctttgttttcaagaaaaaatctcgtttgcaagttgtctgtaatgtatcttagaaatgtttcgttatttttttcagGGTGTATTGGGTATCAAAGTTAAGATCATGCTCGACTGGGACCCAAAGGGCAAGCAAGGACCCATGACCCCTCTTCCAGATGTGGTCACCATCCATATGC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: PP1S31_178V6.1 (Physcomitrella patens), 3'ss of exon 5
-------------------------------------------gtcagttcttcacagtggaaacctgtttcttgaatcacattctacctagtgagatcttgtgtaacctgaatct-ggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                                            | ||||  |   | |       | |   | | |   |    |   ||||    |  |  | | |     | | || |       | ||||||| ||| | ||  ||||||| || |||||||||||||||||||| |||||||| |||||||| ||||| ||  | || ||||| || | ||||||||  |
gtattcttgacagctttttaatcttgttagtctcaaccgttcactgagtttcttcaattattgtgatttcattcggaaggctcgtttattagttttttactacgaatctcaggttttggatgtatgtttttgcagGGAGTGTTGGGCATCAAGGTTAAAATCATGCTTGACTGGGACCCGAAGGGCAAGCAAGGACCTATGACTCCCCTTCCAGATGTGGTTACCATCCATATGC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: PP1S29_222V6.1 (Physcomitrella patens), 3'ss of exon 5
------------------------------------------------------------------gtcagttctt-cacagtggaaacctgtttcttgaatcacattc---tacctagtgagatcttgtgtaacctgaatctg-gttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                                                                   ||  | ||| ||   |   ||   |||   | | | |  ||    ||    ||  | |||  || | |||||||    | || ||     ||||||| ||| | ||| ||||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| ||| | || ||||| || | |||||| |  |
gtattaacagatttttttgatacccctatgtttactcctccttgtgcagaattaatcttcgattgtttccatccttgcattatactaaatagttctataattgaggtttcattattccgttggctctactg-agcctgaattgaagctattccttcttgcagGGAGTGTTGGGTATCAAGGTCAAGATCATGCTCGACTGGGATCCCAAAGGCAAACAAGGACCCATGACTCCACTCCCAGATGTGGTTACCATCCACATGC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: PP1S487_22V6.1 (Physcomitrella patens), 3'ss of exon 4
------------------------------gtcagttcttcacagtggaaacctgtttc--ttgaatcacattctac----ctagtgagatcttgtgt--------aacctgaatctggttaatcacat--------gtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                              |    |||||||   | || |||| || |  ||  |  || ||  |      || ||  |  |  | |        ||  |||  || || | |    |        |||||||| ||  | ||| ||||||||||||| ||||| |||||||||||||||| ||| |||||| |  |||| | | | || ||||| |||| ||| || |  |
gcacgtgtggacattttttgtctaatggtggctgtttcttcatgctagagacctattacacttctacaacgtttcatgtttttaatgctacatcattttctacagaaatatgagacttgtcagttgtcttccttactgtgcagGGAGTATTGGGTATCAAGGTGAAGATTATGCTCGACTGGGACCCCAAGGTCAAGCAAGGATCTGTGACTCTACTTCCAGATGTGGTGACCATTCACATGC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: PP1S136_175V6.1 (Physcomitrella patens), 3'ss of exon 5
------------------------------------------gtcagttcttcacagtggaaacctgtttcttgaatcacattctacctagtgagatcttgtgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                                          | |  | ||  |    |  | | | |||  |  || | |    | | ||||   |   |||| || |   | |  ||| |    |  |||||| ||| | ||  ||||||| ||||||||||| ||||||||||| |||||||| ||||| || ||||| ||  | || ||||| || |  |||||||  |
gtatgtggatcttcatagtgtttttggtcttcaattttctctgacgatgctagatttcgtcatcgtttttgctctat-atacctaatccagtgtattgacgtgttacttt--tttaattactgttcttggcagGGAGTGTTGGGCATCAAGGTAAAGATCATGCTCGACTGGGACCCAAAGGGCAAGCAAGGCCCCATGACCCCTCTTCCAGATGTGGTTACTATCCATATGC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: PP1S127_74V6.1 (Physcomitrella patens), 3'ss of exon 5
-----------------------------gtcagttcttcacagtggaaacctgtttcttgaatcacattctacctagtgagatcttgtgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                             |    || |||  | | ||||  | ||  ||||    |  | | ||    | ||   ||   |         |  ||    |  | | ||||| ||||| ||  | ||||||||||||||||| |||||||| || ||||| || |||||||| ||||| ||| | || ||||| ||||  || || |  |
gtacacaagatgcttgatgtccgtcagtagctcctttttcgtactagaaagatattgattgatagtcggtgttcccgaagtgaatctga--agtggaggattactttggtatgtttacagGGCGTGCTGGGCATTAAGGTGAAGATCATGCTCGACTGGGATCCAAAGGGGAAGCAAGGACCCATGACTCCACTTCCCGATGTAGTGACTATTCACATGC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: EFJ31038 (Selaginella moellendorffii), 3'ss of exon 5
gtcagttcttcacagtggaaacctgtttcttgaatcacattctacctagtgagatcttgtgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                          | |  |||    ||  |    | |  ||||  || |   || |   | |   ||       |||||| ||  | ||  ||||||||||||||||||| |||||||| || ||||||||    || |||  ||||||  |||| ||  | ||||  |||||   ||
-------------------------gtgcaagaactcgatcgttttgatttggatccagttt---ctaagcattg--gattgtgctggcagGGGGTTTTGGGGATCAAGGTGAAGATCATGCTGGACTGGGATCCAAAGGGCAAGACCGGGCCGTCGACACCGCTGCCGGACATGGTGACGATCCAAGTAC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: EFJ34304 (Selaginella moellendorffii), 3'ss of exon 5
gtcagttcttcacagtggaaacctgtttcttgaatcacattctacctagtgagatcttgtgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                          | |  |||    ||  |    | |  ||||  || |     | ||  | ||   |      |||||| ||  | ||  ||||||||||||||||||| |||||||| || ||||||||    || |||  ||||||  |||| ||  | ||||  |||||   ||
-------------------------gtacaagaactcgatcattttgatttggatccagtttc-taagcattggattgtgctggctggcagGGGGTTTTGGGGATCAAGGTGAAGATCATGCTGGACTGGGATCCAAAGGGCAAGACCGGGCCGTCGACACCGCTGCCGGACATGGTGACGATCCAAGTAC

upper sequence: AT5G35530.1 (Arabidopsis thaliana), 3'ss of exon 5
lower sequence: EFJ34676 (Selaginella moellendorffii), 3'ss of exon 5
gtcagttcttcacagtggaaacctgtttcttgaatcacattctacctagtgagatcttgtgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                          | |  |||    ||  |    | |  ||||  || |   || |   | |   ||       |||||| ||  | ||  ||||||||||||||||||| |||||||| || ||||||||    || |||  ||||||  |||| ||  | ||||  |||||   ||
-------------------------gtgcaagaactcgatcgttttgatttggatccagttt---ctaagcattg--gattgttctggcagGGGGTTTTGGGGATCAAGGTGAAGATCATGCTGGACTGGGATCCAAAGGGCAAGACCGGGCCGTCGACACCGCTGCCGGACATGGTGACGATCCAAGTAC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|47831884|gb|CK121568.1|CK121568
EST:     CAACCAAGGAATACATTGATGCTGCAGTTAGGCATGTTCTTCTTAGACAG                         GGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGC
genomic: CAACCAAGGAATACATTGATGCTGCAGTTAGGCATGTTCTTCTTAGACAGgtcagttctt ... acatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGC
EST: gi|47831852|gb|CK121536.1|CK121536
EST:     CAACCAAGGAATACATTGATGCTGCAGTTAGGCATGTTCTTCTTAGACAG                         GGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGC
genomic: CAACCAAGGAATACATTGATGCTGCAGTTAGGCATGTTCTTCTTAGACAGgtcagttctt ... acatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGC
EST: gi|47831894|gb|CK121578.1|CK121578
EST:     CAACCAAGGAATACATTGATGCTGCAGTTAGGCATGTTCTTCTTAGACAG                         GGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGC
genomic: CAACCAAGGAATACATTGATGCTGCAGTTAGGCATGTTCTTCTTAGACAGgtcagttctt ... acatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGC
EST: gi|164093985|gb|ES125819.1|ES125819
EST:     AGGCATGTTCTTCTTAGACAG                         GGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACT
genomic: AGGCATGTTCTTCTTAGACAGgtcagttctt ... acatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACT
EST: gi|86075910|gb|DR371667.1|DR371667
EST:     CAACCAAGGAATACATTGATGCTGCAGTTAGGCATGTTCTTCTTAGACAG                         GGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGC
genomic: CAACCAAGGAATACATTGATGCTGCAGTTAGGCATGTTCTTCTTAGACAGgtcagttctt ... acatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGC
EST: gi|86081922|gb|DR377681.1|DR377681
EST:     CAACCAAGGAATACATTGATGCTGCAGTTAGGCATGTTCTTCTTAGACAG                         GGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGC
genomic: CAACCAAGGAATACATTGATGCTGCAGTTAGGCATGTTCTTCTTAGACAGgtcagttctt ... acatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGC
EST: gi|86081832|gb|DR377591.1|DR377591
EST:     CAACCAAGGAATACATTGATGCTGCAGTTAGGCATGTTCTTCTTAGACAG                         GGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGC
genomic: CAACCAAGGAATACATTGATGCTGCAGTTAGGCATGTTCTTCTTAGACAGgtcagttctt ... acatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

acattctacctagtgagatcttgtgtaacctgaatctggttaatcacatgtgcagGGTGTGCTTGGTCTCAAGGTGAAGATCATGCTTGACTGGGACCCCAAGGGCAAACAAGGACCGATGACACCATTGCCTGATGTTGTGATCATCCATACAC
                                       ttaatca  TA-rich tract