1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtgattaaaacttaaatttcctttgttcttacaatacacataaacgaaacaagctaaaatgcgttatgaaatgtcttttattttatatttgcagGACCTTGCTTCTCACCACGATACCAATCCTGATAGCATCTCTATTGGTTTTAGTAATCTCAAATCTTGTTCACATGAACAGCATTGTGCACGCGGTCTTA
species | Arabidopsis thaliana |
transcript | AT4G35300.3 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ATAGCTGTTGCGATGAGGCTCATGGATCTTTCTGGTCGAAG GACCTTGCTTCTCACCACGATACCAATCCTGATAGCATCTCTATTGGTTTT
genomic: ATAGCTGTTGCAATGAGGCTCATGGATCTTTCTGGTCGAAGgtgattaaaa ... atatttgcagGACCTTGCTTCTCACCACGATACCAATCCTGATAGCATCTCTATTGGTTTT
ataaacgaaacaagctaaaatgcgttatgaaatgtcttttattttatatttgcagGACCTTGCTTCTCACCACGATACCAATCCTGATAGCATCTCTATTGGTTTTAGTAATCTCAAATCTTGTTCACATGAACAGCATTGTGCACGCGGTCTTA
agctaaa putative branch site (score: 3)
ttatgaaatgtctttt TA-rich tract