1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gttcttggacatttattaatctcagccaagttaacactaggagtagcaaaatttttatatgttgacctcagttttctttctttttgttcagTAATATTTTCAAGCTCCGAGATTTCATCAGGAGTGTTTATGTGGACAAAAGATACAGTAGCAGTGACAAGATCTCACAGCAGAAATCG
species | Arabidopsis thaliana |
transcript | AT4G32630.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ATTTATTTTAAAGAATGGGATGCTCACCGTGATGGTTACCCCGATCGCAG TAATATTTTCAAGCTCCGAGATTTCATCAGGAGTGTTTATGTGGACAAAAG
genomic: ATTTATTTTAAAGAATGGGATGCTCACCGTGATGGTTACCCCGATCGCAGgttcttggac ... ttttgttcagTAATATTTTCAAGCTCCGAGATTTCATCAGGAGTGTTTATGTGGACAAAAG
ctaggagtagcaaaatttttatatgttgacctcagttttctttctttttgttcagTAATATTTTCAAGCTCCGAGATTTCATCAGGAGTGTTTATGTGGACAAAAGATACAGTAGCAGTGACAAGATCTCACAGCAGAAATCG
tgttgac putative branch site (score: 3)
cctcagttttctttct CT-rich tract
aaaatttttatatgtt TA-rich tract