1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gttgacatatttacactacttttagaccaaattattgttcattgataatcatattttgttttctctcttcgtgcagCAAGGTCTCCTTTGAACACTTCCTCTG
species | Arabidopsis thaliana |
transcript | AT1G01920.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GTGGAGGTCCTGGTGACAAAGCTTCTTATTTTGGATGGCGATTCCGAAAG CAAGGTCTCCTTTGAACACTTCCTCTGEST: gi|164063789|gb|ES200662.1|ES200662
genomic: GTGGAGGTCCTGGTGACAAAGCTTCTTATTTTGGATGGCGATTCCGAAAGgttgacatat ... cttcgtgcagCAAGGTCTCCTTTGAACACTTCCTCTG
EST: GTGGAGGTCCTGGTGACCAAGCTTCTTATTTTGGATGGCGATTCCGAAAG CAAGGTCTCCTTTGAACACTTCCTCTGGGCAAACTCEST: gi|19874501|gb|AU235332.1|AU235332
genomic: GTGGAGGTCCTGGTGACAAAGCTTCTTATTTTGGATGGCGATTCCGAAAGgttgacatat ... cttcgtgcagCAAGGTCTCCTTTGAACACTTCCTCTGGGCAAACTC
EST: GTGGAGGTCCTGGTGACAAAGCTTCTTATTTTGGATGGCGATTCCGAAAG CAAGGTCTCCTTTGAACACTTCCTCTG
genomic: GTGGAGGTCCTGGTGACAAAGCTTCTTATTTTGGATGGCGATTCCGAAAGgttgacatat ... cttcgtgcagCAAGGTCTCCTTTGAACACTTCCTCTG
ttagaccaaattattgttcattgataatcatattttgttttctctcttcgtgcagCAAGGTCTCCTTTGAACACTTCCTCTG
cattgat putative branch site (score: 4)
tcatattttgttttct putative PPT
aaattattgttcattg TA-rich tract