1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaagttgtgtcatttgcatatttctttttttaatgagatttctttggtcttgcactgatgattaagggagcttcacattcattatagGAAAAGGAGATAAGAAGATTTTCAGGAACAGTACCAAACATGACGACAACAGGCGACTTAGAGAGTATGGCTATGTATGCAGGCCAAAGCGTAGGCCTTA
species | Arabidopsis thaliana |
transcript | AT5G64250.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGAATGAAGTTAACCAACCTATTATTGGACGTTCCACCATACATGGCGTT GAAAAGGAGATAAGAAGATTTTCAGGAACAGTACCAAACATGACGACAACAEST: gi|164217331|gb|ES062563.1|ES062563
genomic: AGAATGAAGTTAACCAACCTATTATTGGACGTTCCACCATACATGGCGTTgtaagttgtg ... ttcattatagGAAAAGGAGATAAGAAGATTTTCAGGAACAGTACCAAACATGACGACAACA
EST: AGAATGAAGTTAACCAACCTATTATTGGACGTTCCATCATACATGGCGTT GAAAAGGAGATAAGAAGATTTTEST: gi|86086960|gb|DR382719.1|DR382719
genomic: AGAATGAAGTTAACCAACCTATTATTGGACGTTCCACCATACATGGCGTTgtaagttgtg ... ttcattatagGAAAAGGAGATAAGAAGATTTT
EST: CCATACATGGCGTT GAAAAGGAGATAAGAAGATTTTCAGGAACAGTACCAAACATGACGACAACA
genomic: CCATACATGGCGTTgtaagttgtg ... ttcattatagGAAAAGGAGATAAGAAGATTTTCAGGAACAGTACCAAACATGACGACAACA
atgagatttctttggtcttgcactgatgattaagggagcttcacattcattatagGAAAAGGAGATAAGAAGATTTTCAGGAACAGTACCAAACATGACGACAACAGGCGACTTAGAGAGTATGGCTATGTATGCAGGCCAAAGCGTAGGCCTTA
cactgat putative branch site (score: 3)
attcattata TA-rich tract