1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtgaattttgtttttcttccttctttcaatttgctttgcattgcattgtggttaattgaaattgttctttgaggattagtattggtctggagattgtagcagttttatctactttgattttgcggaagaatgtttccttgtggtttatgtgcatttcccttactgtgtgtagACAGCAATCGGATATAGCTAGACTTGAAGCTAAAGTTGAGAGGCTTGAAGCGCTACTCCAACAGAAGGACAGAGAAATTGCAACAATTACCAGAACC
species | Arabidopsis thaliana |
transcript | AT5G57410.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GTGATATAGAGTTTAGAGAATCTGCTAATGAGCTGAGACAGAG ACAGCAATCGGAATATAGCTAGACTTGAAGCTAAAGTTGAGAGGCEST: gi|86047425|gb|DR343180.1|DR343180
genomic: GTGATATAGAGTTTAGAGAATCTGCTAATGAGCTGAGACAGAGgtgaattttg ... ctgtgtgtagACAGCAATCGGA-TATAGCTAGACTTGAAGCTAAAGTTGAGAGGC
EST: CGACAACGTGATATAGAGTTTAGAGAATCTGCTAATGAGCTGAGACAGAG ACAGCAATCGGATATAGCTAGACTTGAAGCTAAAGTTGAGAGGCTTGAAGC
genomic: CGACAACGTGATATAGAGTTTAGAGAATCTGCTAATGAGCTGAGACAGAGgtgaattttg ... ctgtgtgtagACAGCAATCGGATATAGCTAGACTTGAAGCTAAAGTTGAGAGGCTTGAAGC
ttttgcggaagaatgtttccttgtggtttatgtgcatttcccttactgtgtgtagACAGCAATCGGATATAGCTAGACTTGAAGCTAAAGTTGAGAGGCTTGAAGCGCTACTCCAACAGAAGGACAGAGAAATTGCAACAATTACCAGAACC
cccttac putative branch site (score: 3)
tttcccttact CT-rich tract
aatgttt TA-rich tract