1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaagtctaattgttctgaggaagcttgaattgaatatatgcaacaaaataatggttttaattagttttgacatatttcactctcatttgcagATAGAAGCCTATCCAAAAGCAACAGCAGTGTTGGTACGCAATCACGGAGTTTACATTTGGGGTGATTCTTGGATCCATGCTAAGACACAG
species | Arabidopsis thaliana |
transcript | AT5G53850.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TAGAGAACACAGCATATGAGAATGAACTAACAGATTCACTTACCAAAGCT ATAGAAGCCTATCCAAAAGCAACAGCAGTGTTGGTACGCAATCACGGAGTTEST: gi|164190881|gb|ES162228.1|ES162228
genomic: TAGAGAACACAGCATATGAGAATGAACTAACAGATTCACTTACCAAAGCTgtaagtctaa ... tcatttgcagATAGAAGCCTATCCAAAAGCAACAGCAGTGTTGGTACGCAATCACGGAGTT
EST: TAGAGAACACAGCATATGAGAATGAACTAACAGATTCACTTACCAAAGCT ATAGAAGCCTATCCAAAAGCAACAGCAG
genomic: TAGAGAACACAGCATATGAGAATGAACTAACAGATTCACTTACCAAAGCTgtaagtctaa ... tcatttgcagATAGAAGCCTATCCAAAAGCAACAGCAG
atgcaacaaaataatggttttaattagttttgacatatttcactctcatttgcagATAGAAGCCTATCCAAAAGCAACAGCAGTGTTGGTACGCAATCACGGAGTTTACATTTGGGGTGATTCTTGGATCCATGCTAAGACACAG
ttttgac putative branch site (score: 3)
tttcactctcattt putative PPT
aaaataatggttttaa TA-rich tract