1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtttacgatttttaaagactggttcttgttctggtttataccggttattcgcttccttgtttaatgttagtttatataattgtatgcagGTGTTTTCAACGTCTTGGAGCATATTGAAGATGAAGAAGAAAATGCAAGTGAGAAGATAAAGTCAAGATTTGGGCCGTTGCTATTCATTATTGCCTTGCT
species | Arabidopsis thaliana |
transcript | AT5G49350.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CGACATCCGTGAAACCCTCAAGTCTGGCTGCAGCTACGGACCTGAACGAG GTGTTTTCAACGTCTTGGAGCATATTGAAGATGAAGAAGAAAATGCAAGTG
genomic: CGACATCCGTGAAACCCTCAAGTCTGGCTGCAGCTACGGACCTGAACGAGgtttacgatt ... ttgtatgcagGTGTTTTCAACGTCTTGGAGCATATTGAAGATGAAGAAGAAAATGCAAGTG
tttataccggttattcgcttccttgtttaatgttagtttatataattgtatgcagGTGTTTTCAACGTCTTGGAGCATATTGAAGATGAAGAAGAAAATGCAAGTGAGAAGATAAAGTCAAGATTTGGGCCGTTGCTATTCATTATTGCCTTGCT
gtttaat putative branch site (score: 4)
ttgtttaatgttagtt TA-rich tract