1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...acttttggcatctgctctgttggttggttggttgagggctgttaacttatgtctgtgtctgtgtgctgccttatatctaatgttctttgagtttctacagGTCAGATTCCACCCGCATCATTCAGAAATAGTTGCGAGTGGAAGTTTAGATCTCGAGGTCCGCTTATGGAATACCACAACTTCTGAATGCATTAGATCTC
species | Arabidopsis thaliana |
transcript | AT5G43930.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CTGGAAACTGCTTAAAAGTTTTGACTGGCCATAGGAGGACTCCTTGGGTA GTAAGTCAGATTCCACCCGCATCATTCAGAAATAGTTGCGAGTGGAAGTTT
genomic: CTGGAAACTGCTTAAAAGTTTTGACTGGCCATAGGAGGACTCCTTGGGTAgtaagttagt ... gtttctacagGT----CAGATTCCACCCGCATCATTCAGAAATAGTTGCGAGTGGAAGTTT
cttatgtctgtgtctgtgtgctgccttatatctaatgttctttgagtttctacagGTCAGATTCCACCCGCATCATTCAGAAATAGTTGCGAGTGGAAGTTTAGATCTCGAGGTCCGCTTATGGAATACCACAACTTCTGAATGCATTAGATCTC
atctaat putative branch site (score: 3)
tttctac putative PPT
ttatatctaatgtt TA-rich tract