1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaagtatctctcttcatggctctgctagtattgttatgttatcattggctaatgttctacaatttgcagCTATTCATTCTTCTCTCATGTGGTCTAGCTGTGTTCTGCAACATAAGCCAGTACCTTTGCATCGGGCGGTTTTCAGCAGTATCGTTCCAAGTTATTGGTC
species | Arabidopsis thaliana |
transcript | AT5G42420.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TTCTTAGTGGGAAGTTCATTATGAAGTATAATATGTCTTCCGGTTGCTTT CTATTCATTCTTCTCTCATGTGGTCTAGCTGTGTTCTGCAACATAAGCCAGEST: gi|86079446|gb|DR375203.1|DR375203
genomic: TTCTTAGTGGGAAGTTCATTATGAAGTATAATATGTCTTCCGGTTGCTTTgtaagtatct ... caatttgcagCTATTCATTCTTCTCTCATGTGGTCTAGCTGTGTTCTGCAACATAAGCCAG
EST: TCATTATGAAGTATAATATGTCTTCCGGTTGCTTT CTATTCATTCTTCTCTCATGTGGTCTAGCTGTGTTCTGCAACATAAGCCAG
genomic: TCATTATGAAGTATAATATGTCTTCCGGTTGCTTTgtaagtatct ... caatttgcagCTATTCATTCTTCTCTCATGTGGTCTAGCTGTGTTCTGCAACATAAGCCAG
catggctctgctagtattgttatgttatcattggctaatgttctacaatttgcagCTATTCATTCTTCTCTCATGTGGTCTAGCTGTGTTCTGCAACATAAGCCAGTACCTTTGCATCGGGCGGTTTTCAGCAGTATCGTTCCAAGTTATTGGTC
ggctaat putative branch site (score: 3)
tattgttatgttat TA-rich tract