1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtatttgtttcaagattaaactttaaatgaagacatggtgtgtttcttcatatagagtttagttgctgacagaatcgaaatttttgtgccttattgagtagATAGGTGAGTCGGCTGGACCGGAATGTAAAGCTGCACTACAAGAGACTAATAAGCTCTTGGAACTAGGGCTTAAAGTGAATAACAGGGCTGTGAAAGCTC
species | Arabidopsis thaliana |
transcript | AT4G36195.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GTTCTGCAGTTGTTCGTGCAGTCTACGAATTCCCTGAATTTGATCAACAG ATAGGTGAGTCGGCTGGACCGGAATGTAAAGEST: gi|116406543|gb|EG449135.1|EG449135
genomic: GTTCTGCAGTTGTTCGTGCAGTCTACGAATTCCCTGAATTTGATCAACAGgtatttgttt ... tattgagtagATAGGTGAGTCGGCTGGACCGGAATGTAAAG
EST: GTTCTGCAGTTGTTCGTGCAGTCTACGAATTCCCTGAATTTGATCAACAG ATAGGTGAGTCGGCTGGACCGGAATGTAAAGCTGCACTACAAGAGACTAAT
genomic: GTTCTGCAGTTGTTCGTGCAGTCTACGAATTCCCTGAATTTGATCAACAGgtatttgttt ... tattgagtagATAGGTGAGTCGGCTGGACCGGAATGTAAAGCTGCACTACAAGAGACTAAT
ttcatatagagtttagttgctgacagaatcgaaatttttgtgccttattgagtagATAGGTGAGTCGGCTGGACCGGAATGTAAAGCTGCACTACAAGAGACTAATAAGCTCTTGGAACTAGGGCTTAAAGTGAATAACAGGGCTGTGAAAGCTC
tgctgac putative branch site (score: 2)
ccttatt putative PPT
aaatttttgt TA-rich tract