Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagataaagaccactcctttactggcatattgatacagagtgcggtttttaatctgtgatctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT

Basic information

species Arabidopsis thaliana
transcript AT4G34670.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: LOC_Os03g10340.1 (Oryza sativa), 3'ss of exon 3
gtaagataaagaccactcctttactggca--tattgatacagagtgcggtttttaatctgtgatctct---gtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
      |||  |   || | |    |  |  || |  ||     |    ||| |        |  |||   |||||| |||   || || ||||| ||||| || ||| | || ||||||||||||||  ||||||| || ||||| ||||| |||||||||||||||||||   
-----gtaattattccttcataggagaaaattacttctattagatttattttgttgctaaccagttctattgtagGGCATGTCGTTTACTACCGATAAGCTCAGATCACTTGTTAAGAAGTGGCAGACACTGATTGAGGCTCATGTGGATGTCAAAACCACAGACGGCTACATGC

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: LOC_Os02g18550.1 (Oryza sativa), 3'ss of exon 3
------------gtaagataaagaccactcctttactggcatat---tgatacagagtgcggtttttaatctg----------tgatctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
             |    |    |  | ||||||  ||   |||   |||| |    ||   | | || |||           |  | ||| ||||| |||  ||| || || ||||| || ||||| ||||| ||||| ||||| || ||||||||||||||||| ||||| || ||||||||   |||||   
gtaagaatgagcattgattgttcattaatccttttgtgttgtatctgtgatcccttttgtcctatgtagtctaaaccaatacatattttctctagGGCATGAGTTTTACCACGGACAAACTTAGGTCCTTGGTCAAGAAATGGCAAACATTGATTGAAGCCCATGTGGATGTTAAGACCACAGATAACTACATGC

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: LOC_Os12g21798.1 (Oryza sativa), 3'ss of exon 3
gtaagataaagaccactcctttactggcatattgatacagagtgcggttt------ttaatctgtgatctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
||||        |   | || | |     || |  | |||  ||   |||      |||| | ||  | | ||||||| |||  |||||| ||||||||||| || |||||||| ||||| ||||||||  | || || || ||||| ||||| || ||||| ||   |||||   
gtaatgctt---ctcttactgtgcaaaattacttctccaggttgtaatttttgttgttaaccagttgtat-tgtagGGCATGAGTTTCACGACCGACAAGCTCAGATCATTGGTCAAGAAATGGCAGACGCTAATAGAGGCTCATGTGGATGTAAAGACCACTGATAACTACATGC

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GRMZM2G013457_T01 (Zea mays), 3'ss of exon 3
gtaagataaagaccactcctttactggca--tattgatacagagtgcggttttta-----atctgtgatctctgta---gGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
     || |  | || ||  |||||  |   | |||      | |  | | | ||     |  |||  | |   ||   ||| ||| |||| || ||||| ||||| || ||  | || |||||||||||||| ||||||||||||||||| ||||| || || || |||  |||||   
--gtaatgatcagcattctgttactcactgctgttgcccttaattctgttctctatcataacttgtttttttattactagGGCATGAATTTTACCACCGATAAGCTCAGATCTCTAGTAAAGAAGTGGCAGACATTGATTGAAGCCCATGTTGATGTCAAGACAACCGACAACTACATGC

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GRMZM2G030915_T03 (Zea mays), 3'ss of exon 3
gtaagataaagaccactcctttactggca--tattga--tacagagtgcggttt----ttaatctgtgatctct--gtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
     || |    || || ||| || |||  | |||   |     |||  ||||     |||| |||  ||| |   ||||||||| |||| || || || ||  | |||||  | ||||||||||||||||| || || ||||||||||| ||||| || || || |||  |||||  |
--gtaatgatcggcattcttttgctagcagctgttgccctttgttgtgttgtttatcactaatttgttttctattactagGGTATGAATTTTACCACTGATAAATTGAGGTCCCTAGTGAAGAAGTGGCAGACATTAATCGAAGCCCATGTTGATGTCAAGACAACCGACAACTACATGT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GRMZM2G030915_T02 (Zea mays), 3'ss of exon 3
--------------------gtaagataaagaccactcctttactggca--tattgatacagagtgcggttttta------atctgtgatc--tctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
                    |    ||||    || || ||| ||  ||  | |||        || ||| ||||      |  |||  ||  | | ||||||||| |||| || || || || || || ||  | ||||||||||||||||| || || ||||||||||| ||||| || || || |||  |||||  |
gaatgtgctcacaaacttttgggtaataatcggcattcttttgctaacagctgttgccctttgttgtggtgtttatcactaacttgttttctatttctagGGTATGAATTTTACCACTGATAAACTGAGATCCCTAGTGAAGAAGTGGCAGACATTAATCGAAGCCCATGTTGATGTCAAGACAACCGACAACTACATGT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GRMZM2G703354_T01 (Zea mays), 3'ss of exon 3
---------------gtaagataaagaccactcctttactggcatattgatacagagtgcggttt--ttaatctgtgatctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT---
                |  | |      ||| |   ||   |  |  || | ||   | |   ||    |   ||| | ||   |||||||||  ||||||||| ||||||||    |||||||||||||||||||| |    | | |||| | |||  || |  ||||    |||  |  | |      
gtaatgatctatattatctggttcgcttcacactgctatgaggcttatgttccaagttccatattaaccatcttgtcaacttgttagGGTATGAGTTTCACAACGGACAAGCTCCATTCATTGGTGAAGAAGTGGCATAAA--GGTGGAAGACTATGCAGA-GCAAAAAAATGAGAGAGTAAGAAGGAAT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GRMZM2G030915_T08 (Zea mays), 3'ss of exon 3
gtaagataaagaccactcctttactggca--tattgatacagagtgcggttttta------atctgtgatc--tctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
     ||||    || || ||| ||  ||  | |||        || ||| ||||      |  |||  ||  | | ||||||||| |||| || || || || || || ||  | ||||||||||||||||| || || ||||||||||| ||||| || || || |||  |||||  |
--gtaataatcggcattcttttgctaacagctgttgccctttgttgtggtgtttatcactaacttgttttctatttctagGGTATGAATTTTACCACTGATAAACTGAGATCCCTAGTGAAGAAGTGGCAGACATTAATCGAAGCCCATGTTGATGTCAAGACAACCGACAACTACATGT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GRMZM2G145258_T01 (Zea mays), 3'ss of exon 3
gtaa-gataaagaccac-tcctttactggcatattgatacagagtgcggttt----ttaatctgtgatctct--gtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
|||| |||    |  |  |   | || |   |     |     ||   ||||     |||  |||  ||| |   ||||| ||| |||| || || || || || || ||  | ||||||||||||||||| || || ||||||||||| ||||| || || || |||  |||||  |
gtaatgatcggcattatgttgctcacagctgttgccctttgttgttttgtttatcactaacttgttttctattactagGGCATGAATTTTACCACTGATAAACTCAGATCCCTAGTGAAGAAGTGGCAGACATTAATCGAAGCCCATGTTGATGTCAAGACAACCGACAACTACATGT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA20G28780.3 (Glycine max), 3'ss of exon 3
------------------------------gtaagataaagaccactcctttactg-gcatattgatacagagtgcggtttttaatctgtgatctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
                              |   |  | |    | | | ||| |   |  ||  ||   || |     ||||| ||| |||  |   ||||| |||||||||||||| |||||||| ||||||||||||   || ||||| ||| | |||||||||||||| |||||||| || || ||   |||||| |
gtatgatgggtgatgcatgaagcttcttttgattgtaatattgtattgcattattatactcatcaattttgaatttttgttttattctttgaatttc-tagGGAATGGATTTCACAACTGACAAGCTGAGGTCATTGGTGCGAAAATGGCAAACTCTAATTGAAGCCCATGTGGATGTGAAGACAACTGATAACTACACAT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA10G39050.1 (Glycine max), 3'ss of exon 3
---------gtaagataaagaccactcctttactggcatattg---------ataca--gagtgcggtttttaatctgtgatct----ctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
         || |       | |     || | ||  ||||||         |||||   | |  |  |||   | | |  | |     | ||||| |||||||||||||| |||||||| |||||||||||    || ||||| ||| | |||||||||||||| |||||||| || || ||    ||||| |
gtatgatgggtgatgcctgaagcttcttttgattgtaatattgtattgcattatacatcaaatttgaatttctgtttattctttgaatttctagGGAATGGATTTCACAACAGACAAGCTGAGGTCATTGGTACGAAAATGGCAAACTCTTATTGAAGCCCATGTGGATGTGAAGACAACTGATAATTACACAT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA06G11940.1 (Glycine max), 3'ss of exon 3
---------------------gtaagataaagaccactcctttac-tggcat--attgatacagagtgcggtttttaatctgtgatctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
                     |  | |||  |  || |  ||| | ||   |  ||| ||      |  | || | | | |   |||||||||||| |||  ||||||||| |||||| | ||||||||||||   || ||||| ||||| |||||||| ||||  |||||||| ||||| ||    || || |
gtatagcttcttttggttgctgctatatattg-tcattgatttgcatgattttaattaatcttagctaagattgtaactat---atctctgtagGGAATGAGTTTCACAACTGACAAGTTGAGGTCATTGGTGCGAAAATGGCAAACTTTAATTGAAGCTCATGCTGATGTGAAGACCACTGATAATTATACTT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA01G44700.1 (Glycine max), 3'ss of exon 3
gtaagataaagaccactcctttactggcatattgatacagagtgcggt--ttttaatctg--------tg-atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
||| |||   | |    | | | |||    | || |   || |  | |  |||||||||         ||  ||| ||||||| |||||||||||||| || ||| | ||||| ||||||  ||| ||||| ||||| |||||||| ||||| ||||| || ||||| ||    || || |
gtatgatggtggctgagcttattctgat-cactgttgttgactcagatggttttaatctaactaagactgtgtctttgtagGGAATGGATTTCACAACTGATAAGTTGAGGTCCTTGGTGCGGAAATGGCAAACTTTAATTGAAGCTCATGTGGATGTCAAGACCACTGATAATTATACGT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA11G00890.1 (Glycine max), 3'ss of exon 3
gtaagataaagaccactcctttactggc-----atattgatacagagtgcgg---tttttaatctgtgatctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
||| |||   | |    | | |  ||        ||||||  ||| ||       || ||||  |   ||||   ||||| |||||||||||||| |||||| | ||||| ||||||   || ||||| ||||| |||||||| ||||| ||||| || ||||| ||    || || |
gtatgatggtggctgggcttattttgatcactgttattgactcagtgttttaatcttattaagattgtatcttcctagGGAATGGATTTCACAACTGACAAGTTGAGGTCTTTGGTGCGAAAATGGCAAACTTTAATTGAAGCTCATGTGGATGTTAAGACCACTGATAATTATACAT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: Vv14s0030g01810.t01 (Vitis vinifera), 3'ss of exon 4
-------------gtaagataaagaccactcctttactggcatattgatacagag---tgcggtttttaatctgt---gatctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
             |  || ||        |  |||| |  |||    |    ||    || ||||| | || | |    ||   |  |||| ||||| || ||||| |||||||| ||||| ||||||   ||||||||||| |||||||| || ||||| ||||| || || |||||   ||||||| 
gtgggcatagcatgacagttagcctttttttttttaattacatgcaaaagaggaaaattggggtttctcattttttttaataatttcagGGAATGGACTTTACAACAGACAAGCTGAGGTCTTTGGTGCGCAAGTGGCAGACATTGATTGAGGCTCATGTGGATGTTAAGACAACAGATAACTACACCC

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: Vv05s0020g03900.t01 (Vitis vinifera), 3'ss of exon 4
-----------------------------------------gtaagataaagaccactcct----ttactggcatattgat----------acagagtgcggtttttaatctgt-gatctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
                                         ||||  | | ||  | |  |    ||| |    |||| ||          ||| | ||   || ||   || | |     |  |||| |||||||| ||||| |||||| | ||||| ||||||  ||| ||||| || ||||||||||| ||||| |||||||| || || |||  ||||||||
gtatgacagagatcctgaggtcctataaattttcattctatgtaatcttatgattatttttatttttatttatgtatttatttattttttaacaaaatgtttttcttttccttttggaaaatacagGGAATGGATTTTACAACTGACAAGTTGAGGTCTTTGGTGCGGAAATGGCAAACATTGATTGAAGCTCATGTGGATGTGAAGACAACTGACAACTACACCT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: PP1S174_49V6.1 (Physcomitrella patens), 3'ss of exon 3
------------------gtaagataaagaccactcctttact------ggcatattgat-acagagtgcggt----ttttaatctgtgatctct-gtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
                     || |||  ||   |  || | |      || ||  | || ||||  |  |||    || | |    |||  ||| |||||| ||||| || ||||||||||||||  ||||  |||||   |||||||||| |||||| ||||| ||||| ||||| |||||||| |||   |||    
ccgagagggcttcttgagaggagttaagaacaggtggttgattctaggaggaatcctcatgacaggttatggtcatattctgacagctgaattcttgtagGGCATGGACTTGACAACCGACAAGCTGCGGTCTCTGGTGCGCAAGTGGCAGAGTTTGATCGAAGCTCATGTGGATGTAAAAACCACGGACAATTACCAGC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|163981150|gb|ES204484.1|ES204484
EST:     TCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTCGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGG
genomic: TCTTAGAGCTGAAGATGTTCAGGGAAGGAATGT-GTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGG
EST: gi|86054239|gb|DR349996.1|DR349996
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATATGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054283|gb|DR350040.1|DR350040
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATATGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054294|gb|DR350051.1|DR350051
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATNGATTTCACAACCGACAAGCTAAGGTCATTGGTG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTG
EST: gi|86054257|gb|DR350014.1|DR350014
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054264|gb|DR350021.1|DR350021
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054274|gb|DR350031.1|DR350031
EST:     GTCTTASAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGAC
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGAC
EST: gi|86054293|gb|DR350050.1|DR350050
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054267|gb|DR350024.1|DR350024
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054247|gb|DR350004.1|DR350004
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|125145890|gb|EL181058.1|EL181058
EST:     AATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: AATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054252|gb|DR350009.1|DR350009
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGGTGAWGAAGTGGCA
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGG-TGAAGAAGTGGCA
EST: gi|86054250|gb|DR350007.1|DR350007
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054270|gb|DR350027.1|DR350027
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATATGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|164010004|gb|ES017288.1|ES017288
EST:     GACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAG
genomic: GACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAG
EST: gi|86054281|gb|DR350038.1|DR350038
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|164204917|gb|ES167944.1|ES167944
EST:     GTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054284|gb|DR350041.1|DR350041
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATATGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054242|gb|DR349999.1|DR349999
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGNCAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054272|gb|DR350029.1|DR350029
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCA-A-CCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCA
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCA
EST: gi|86054277|gb|DR350034.1|DR350034
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGA
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGA
EST: gi|86054289|gb|DR350046.1|DR350046
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|164208997|gb|ES130424.1|ES130424
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGG
EST: gi|86054249|gb|DR350006.1|DR350006
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATATGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054259|gb|DR350016.1|DR350016
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054233|gb|DR349990.1|DR349990
EST:     GTCTTAGAGCTGAGGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054296|gb|DR350053.1|DR350053
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTG
EST: gi|86054240|gb|DR349997.1|DR349997
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054254|gb|DR350011.1|DR350011
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTRG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTCGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054285|gb|DR350042.1|DR350042
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054280|gb|DR350037.1|DR350037
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054241|gb|DR349998.1|DR349998
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054263|gb|DR350020.1|DR350020
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGTAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054256|gb|DR350013.1|DR350013
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGTGTGAA
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTG-GTGAA
EST: gi|86054282|gb|DR350039.1|DR350039
EST:     GTCTTAGAGCTGAGGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054271|gb|DR350028.1|DR350028
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGCAAGAAGTGGCA
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTG-AAGAAGTGGCA
EST: gi|86054258|gb|DR350015.1|DR350015
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054287|gb|DR350044.1|DR350044
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCASTTCTGG                         GGTATGGATTTCACAACCGACAAGCT
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCT
EST: gi|86054253|gb|DR350010.1|DR350010
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|164054042|gb|ES069201.1|ES069201
EST:     ATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: ATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054295|gb|DR350052.1|DR350052
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054279|gb|DR350036.1|DR350036
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCA-A-CCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054236|gb|DR349993.1|DR349993
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054297|gb|DR350054.1|DR350054
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATATGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054288|gb|DR350045.1|DR350045
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATATGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTC
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTC
EST: gi|86054251|gb|DR350008.1|DR350008
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054248|gb|DR350005.1|DR350005
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCA-A-CCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|164080636|gb|ES097475.1|ES097475
EST:     TGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGATGTGGCAG
genomic: TGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054266|gb|DR350023.1|DR350023
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054290|gb|DR350047.1|DR350047
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATATGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|164043382|gb|ES154054.1|ES154054
EST:     CCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: CCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054243|gb|DR350000.1|DR350000
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054246|gb|DR350003.1|DR350003
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054273|gb|DR350030.1|DR350030
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATATGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054265|gb|DR350022.1|DR350022
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCA-A-CCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054268|gb|DR350025.1|DR350025
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCA
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTT-CACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCA
EST: gi|86054235|gb|DR349992.1|DR349992
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATATGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGTSA
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGC-A
EST: gi|86054244|gb|DR350001.1|DR350001
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054260|gb|DR350017.1|DR350017
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054237|gb|DR349994.1|DR349994
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054262|gb|DR350019.1|DR350019
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054234|gb|DR349991.1|DR349991
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
EST: gi|86054286|gb|DR350043.1|DR350043
EST:     GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGG                         GGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG
genomic: GTCTTAGAGCTGAAGATGTTCAGGGAAGGAATGTGTTGACCCAGTTCTGGgtaagataaa ... atctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctcctttactggcatattgatacagagtgcggtttttaatctgtgatctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT
                                 ttttaat  putative branch site (score: 3)
                                              tctctgt  putative PPT
                                tttttaatct  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaagataaagaccactcctttactggcatattgatacagagtgcggtttttaatctgtgatctctgtagGGTATGGATTTCACAACCGACAAGCTAAGGTCATTGGTGAAGAAGTGGCAGACTTTGATTGAAGCCCATGTCGATGTGAAAACCACAGACGGCTACACCT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGC