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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgcaaatatttctcagtgtttcaattccattctcgttatagtttaacttgaatctcactggtttctgggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA

Basic information

species Arabidopsis thaliana
transcript AT3G13920.4
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA15G18760.3 (Glycine max), 3'ss of exon 4
--------------gtatgcaaatatttctcagtgtttcaattccattctcgttatagtttaacttgaa-----tctcactggtttctgggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
                ||   | |  || |  |  | |   ||   ||  |   | |  || | |   |     | | ||     | |   |||| |||||||||||| ||||||||| | |||||| | ||||| ||||| || || ||||| || |||||||| || || || |||||||||||||||||||||||||
ttgaattatcctggagattttatttattattggcctatttgtttagtttcccaaacaaatttattcataagtgctttaaccttaatttcatttttatcagATCTATGATATATTCCAGTTGCTTCCATCTAAGATTCAAGTGGGAGTTTTCTCTGCTACAATGCCTCCTGAGGCACTTGAGATCACAAGGAAGTTCATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA09G07530.3 (Glycine max), 3'ss of exon 4
--------------------------gtatgcaaatattt-ctcagtgtttcaattccattctcgttatagtttaacttgaatctcactggtttctgggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
                           |||     |||||  | |||||  |||    |||    | |||  |   ||| || || |    ||||    |||| |||||||||||| ||||||||| | |||||| | ||||| ||||| || || ||||| || |||||||| || || || |||||||||||||||||||||||||
tttgaattatcctggagattttatttatattggcctatttgtttagtgtcccaaacaaatttat-tcataagt--gctttaacctta---atttc--atttttatcagATCTATGATATATTCCAGTTGCTTCCATCTAAGATTCAAGTGGGAGTTTTCTCTGCTACAATGCCTCCCGAGGCACTTGAGATCACAAGGAAGTTCATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA07G00950.1 (Glycine max), 3'ss of exon 4
-------------------gtatgcaaatattt---ctcagtgtttcaattccattctcgttatagtttaacttgaatctcactggtttctgggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
                    |||  |  ||| |   |    |     |||| |   ||| |    | || || |   | | |    |||    | | || |||||||||||||| || ||||| || ||| | || || || ||||| |||||||| || ||||||||||||||||| |||||||| ||||| ||||||||||
agttataagaagaaatacaatatttatttatctggacaggatacaagaatttccccctcttccatgcttgacat---tgtgaaaattttggttggtgttgcagATCTATGACATCTTTCAGCTGCTGCCATCCAAAATTCAGGTTGGAGTGTTCTCTGCTACAATGCCACCAGAAGCCCTTGAGATTACAAGAAAGTTCATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA08G20300.3 (Glycine max), 3'ss of exon 4
-----gtatgcaaatatttctcagtgtt-tcaattccattctcgttatagttta-----------acttgaatctcactggtttctgggt--tttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
     | || |||  ||||| ||      |   |   |     || | ||||||            |||||   |       || ||| |  | || |||||||||||||| |||||||| || ||| | || || || ||||| |||||||| || |||||||| |||||||| ||||| || ||||||||||||||||
ggacaggatacaagaatttcccaaaacaatttctgtgagaaatgtaacagtttatgttcttccatgcttgacattgtgaaaattttggttggtgttgcagATCTATGACATCTTCCAGCTGCTGCCATCCAAAATTCAGGTTGGAGTGTTCTCTGCTACAATGCCGCCAGAAGCCCTTGAAATTACAAGGAAGTTCATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA06G05580.1 (Glycine max), 3'ss of exon 4
------------gtatgcaaatatttctcagtgtttcaattccatt-ctcgttatagtttaactt----gaatctcactggt--ttctgggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
              || ||||||  |   | | | ||       |   || |||   | || |||     | ||| |||     || |      || ||||||||||| || || ||||| || ||||| |||||||| ||||| || ||||| || |||||||| || ||||| || || |||||||||||||| ||||
atgtttaatatgaaatacaaatacctacaactttatctgccttttggttcattaagatgtatctttctgaattctgactttctcttttaccaccttccagATCTATGATATTTTTCAGCTGCTGCCACCTAAGATCCAGGTTGGGGTTTTCTCTGCCACAATGCCTCCTGAAGCCCTGGAAATCACAAGGAAGTTTATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA04G05580.1 (Glycine max), 3'ss of exon 4
-------------gtatgcaaatatttctcagtgtttcaattccattctcgttatagtttaactt---gaatctca---ctggtttctgggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
               || ||||||  |   | | | ||       |  |   || ||| || | |   |||| |      || ||| |      || ||||||||||| || || ||||| || ||||| |||||||| ||||| || ||||| || |||||||| || ||||| || || |||||||||||||| ||||
catgtttaatatgaaatacaaataccttcaactttatctgccttttggttcataaagtgtatccttctgaattttgactttgttttttaccaccttccagATCTATGATATTTTTCAGCTGCTGCCACCTAAGATCCAGGTTGGGGTTTTCTCTGCCACAATGCCTCCTGAAGCCCTGGAAATCACAAGGAAGTTTATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA17G06110.1 (Glycine max), 3'ss of exon 4
------gtatgcaaatatttctcagtgtttcaattccattctcgttatagt-ttaacttgaatctcactggttt---ctgggtttttt---------cagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
        ||  |  | ||||  ||  | |    |   |  |  | | ||  || | ||   | | |||| | |   || |||||| |         |||||||| || ||||| ||||| |||||| | ||||| ||||| || || ||||| || |||||||| || || || ||||||||||| |||||||| ||||
aagtttcaattgacttttttccaagcctattgggtttgtagtgctaaaagaattgatttatgtataactgctctaaccttggttttattgttatcatcagATCTACGATATATTTCAGCTGCTTCCATCTAAGATTCAAGTGGGAGTTTTCTCTGCCACAATGCCTCCTGAGGCCCTTGAGATCACCAGGAAGTTTATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA15G03020.1 (Glycine max), 3'ss of exon 4
---------------------------------------------------------------------------------gtatgcaaatatttctcagtgtttcaattccattctcgttatagt---------ttaacttgaatctcactggtttctgggtttttt----------cagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
                                                                                  | |  ||||| ||||   | |   |  |   | || | |  |||         |||  | ||     |   |||| |   |||  |          |||||||||||||| |||||||| || |||    | || || ||||| |||||||| || ||||||||||| || || || ||||| ||||||||||||||||
gtttgatggttttccatgttttgtctaaaactttgaattgtttttcttttccttgagtgtcatctaaacattctttcatgcatgttgaaataattctttatttaaaacctgtgtgctagatgaagtcatcttgtgttagatagatagctaacagtttatatttttcgtgcatgaaatgcagATCTATGACATCTTCCAGCTACTGCCAGGTCAAATTCAGGTTGGAGTGTTCTCTGCTACAATGCCACCTGAGGCCCTGGAGATTACAAGGAAGTTCATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: GLYMA13G16570.1 (Glycine max), 3'ss of exon 4
---------gtatgcaaatatttctcagtgtttcaattccattctcgttatagt-ttaacttgaatctcactggttt---ctgggtt------ttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
         | ||  || | ||||| ||  | |    |   |  |  | | ||  || | ||   | | | |  | |   || || |      || ||||||||| || ||||| ||||| || ||| | ||||| ||||| || || ||||| || |||||||| || || || ||||||||||| |||||||| ||||
agtgcctttgaattgaattttttctgagcctattgggtttgtagtgctaaaagaattgatttatgtataaatactctaaccttggctttattgttatcagATCTACGATATATTTCAGCTGCTGCCATCTAAGATTCAAGTGGGAGTTTTCTCTGCTACAATGCCTCCTGAGGCCCTTGAGATCACTAGGAAGTTTATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: Vv11s0016g01920.t01 (Vitis vinifera), 3'ss of exon 3
---------------------gtatgcaaatatttct--cagtgtttcaattccattctcgttatagtttaacttgaatctcactggtttctgggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
                     |||| | || |       ||   |||||| |  | |    |||||       |  |||   | | ||||||   |  || ||||||||||| || ||||| || || ||| ||||  | |||||||| |||||||| || ||||||||||| || || |||||||| ||||||||||| ||||
ttatttttttaactctgtgttgtattccaagaacctcaacaacctttcaactttaatgcgtttatatcactgttctaataa-attagtttct---tccttgcagATCTATGATATTTTCCAACTCCTGCCATCAAAAGTTCAAGTTGGAGTGTTCTCTGCCACAATGCCACCCGAGGCCCTTGAGATTACAAGGAAGTTTATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: Vv04s0008g00980.t01 (Vitis vinifera), 3'ss of exon 1
----gtatgcaaatatttctcagtgtttcaattccattctcgttatagtttaa-cttgaatctcactggtttctgggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
     ||| | |    || || ||||||  ||   | | |  || |||   || ||||  |  |     | | |   |   | ||||||||||| || ||||||||||| |||  ||  ||||| || ||||| ||||| || |||||||| || || | ||||||||| || | |||||||||||
gtctttat-ctagctcttgtccgtgttttcataagaattt--ttgtagccaaaacttgtgttcctaaattgttttcttgcctgcagATCTATGAGATTTTCCAGCTTCTGCCAGAAAGAATCCAGGTGGGTGTTTTCTCTGCTACAATGCCCCCTGAGGTTCTTGAGATTACCAAGAAGTTCATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: Vv09s0002g01760.t01 (Vitis vinifera), 3'ss of exon 4
--------------------------------------------------------------------------------------------------------gtatgcaaatatttctcagtgttt-caa--ttccattctcgttatagtttaacttgaatctcactggtttctg--ggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
                                                                                                         |||      |||| ||| | | | |||  ||  | |  | || | ||||  ||   |  ||| |  ||| |   | |  | ||||||||||||||| |||||||| || ||| | ||  |||| ||||| |||||||| || |||||||| || || || |||||||||||  | ||||||||||
gtctgttctattatatctctgtttctttactagttgtaatatttttgcatacttcatggtgaagaacattattttgctaattgttagaagttcatgctcattgcttattgctggatttttcaatatgtgcaagttttgactggctttgttgtttttctgataattcattaattttttttgctgctgtcagATCTATGACATTTTCCAGCTGCTGCCATCTAAAGTCCAGGTTGGAGTGTTCTCTGCCACAATGCCCCCTGAGGCCCTTGAGATCACTCGAAAGTTCATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: Vv04s0008g01000.t01 (Vitis vinifera), 3'ss of exon 3
-----------gtatgcaaatatttctcagtg-----tttcaattccattctcgttatagtttaacttgaatctcactggtttctgggtttttt----cagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
           |  |||||  ||||    |||     | | | || |||   | || || |     ||   | ||  || |       |||  |    ||||||||||| || |||||| | || ||| ||||||| || ||||| |||||||| || || |||||||| || || ||||||||||||||||| |||||||
tttagctatgtggttgcaagcattttgttgtgggttttctgactttcatgtgcattctaatgctgatttcttgtc-ttgatactgaaatttcatttggcagATCTATGATATTTTCCAGTTGCTGCCATCAAAGATTCAGGTTGGGGTGTTCTCTGCCACGATGCCACCTGAGGCCCTTGAGATCACAAGGAAATTCATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: PP1S31_150V6.5 (Physcomitrella patens), 3'ss of exon 4
--------------------------------------------------------------gtatgcaaatatttctcagtgtttcaatt-ccattctcgt-------------tatagtttaacttgaatctcactggtttctgggtttttt-cagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
                                                              || ||      | | |||||  |  ||||  | | ||  |             ||| | | |||   ||    | || ||   |  | || | ||||| |||||||| ||||||||||||||||  ||| | ||||| |||||||| || || ||||||||||| ||||| ||||||||||| |||||||||||||
gtttgttcggagagtcctggaatggtagaagaaatttgtttttactcccaagaaaactaattgtttgtgtgactatttcagttctctaattatcctccttataagctatgagagatattgctcaacgctaacgaaattgattcgggcatcttctgcagATTTATGACATCTTCCAGCTTCTTCCACAGAAGCTTCAAGTGGGTGTGTTTTCTGCCACAATGCCACCCGAAGCGCTTGAGATCACCAGGAAGTTCATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: PP1S136_29V6.4 (Physcomitrella patens), 3'ss of exon 4
----------------------------------------------------------gtatgcaaatatttctcagtgtt--tcaattcc-------attctcgttatagtttaacttgaatctcactggtttctgggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
                                                           || | || |  |  | |   ||  || |   |        ||   | |     || ||||   ||  | ||| |    |  || | ||||| |||||||| |||||||||||||| |  ||| | ||||||||||||||||| || || |||||||| ||||||||||| ||||| || || |||||||
gtgtgtaaaggatttttcaagttcagtagaacttgcatgatcttattgttcctggatgataaggaagtgatctttatacttgctcgacagctgtgaaagttggtgctgcttattgacttaggtcagattgggt----gagttgtgcagATTTATGACATTTTCCAGCTTCTTCCCCAGAAGCTTCAAGTTGGTGTGTTCTCTGCCACCATGCCACCCGAAGCTCTTGAAATCACCAGAAAATTCATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: PP1S383_1V6.3 (Physcomitrella patens), 3'ss of exon 3
-------gta-tgcaaatatttctcagtgtttcaat-------tccattctcgttatagtttaac-----ttgaatctcactggtttctgggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
       ||  |   | ||| || || |||||  ||       |   |    ||||  ||  ||       | | |  || || | ||    |   | ||||| || ||||| || ||||| || || |  ||| | ||||| ||||| ||||| || || ||||| || ||||| || ||||||||||||||||||||||
gtgttgagtggtctgagtatgtcgcactgttttgataggggtgttggtgactgttacggtgaaaaggccgcttacttgcagtgatgtccaa-tacgtgcagATTTACGACATCTTTCAGCTGCTGCCCCAGAAGCTTCAAGTGGGTGTTTTCTCTGCTACCATGCCTCCTGAAGCCCTCGAGATCACAAGGAAGTTCATGA

upper sequence: AT3G13920.2 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: PP1S77_16V6.1 (Physcomitrella patens), 3'ss of exon 3
-----------gtatgcaaatatttctcagtgtttcaattccattctcgtta--tagttta-acttgaatctcactggtttctgggtttttt-----cagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
           |   |    |    |   |||  |   |  || | |||| |  | | ||  ||  |   || ||  | | | | ||   |      ||||| || ||||| |||||||| || || |  ||| | ||||| || ||||||||||| || ||||| || ||||| || |||||||| |||||||||||||
gtggtagggtagggagtggttggagcagcgtgggtgcgtggcagtgtcgtgacttggcttggacgagtggcttacctggtgcggtgtccatgacgtgcagATTTACGACATCTTCCAGCTGCTGCCCCAGAAGCTTCAAGTGGGCGTGTTCTCCGCCACCATGCCCCCGGAAGCCCTCGAGATCACGAGGAAGTTCATGA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|124839545|gb|EH923984.1|EH923984
EST:     GTTCTCGATGAAGCTGATGAAATGCTCTCCCGTGGTT-CAAGGACCAG                         ATCTATGACATATTCCAG
genomic: GTTCTCGATGAAGCTGATGAAATGCTCTCCCGTGGTTTCAAGGACCAGgtatgcaaat ... gttttttcagATCTATGACATATTCCAG
EST: gi|116436248|gb|EG478840.1|EG478840
EST:     TTGTTCTCGATGAAGCTGATGAAATGCTCTCCCGTGGTTTCAAGGACCTG                         ATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTC
genomic: TTGTTCTCGATGAAGCTGATGAAATGCTCTCCCGTGGTTTCAAGGACCAGgtatgcaaat ... gttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTC
EST: gi|164080088|gb|ES153605.1|ES153605
EST:     GTTCTCGATGGAGCTGATGAAATGCTCTCCCGTGGTTTCAAGGACCAG                         ATCTATGACATATTCCAG
genomic: GTTCTCGATGAAGCTGATGAAATGCTCTCCCGTGGTTTCAAGGACCAGgtatgcaaat ... gttttttcagATCTATGACATATTCCAG
EST: gi|47831463|gb|CK121147.1|CK121147
EST:     TTGTTCTCGATGAAGCTGATGAAATGCTCTCCCGTGGTTTCAAGGACCAG                         ATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTC
genomic: TTGTTCTCGATGAAGCTGATGAAATGCTCTCCCGTGGTTTCAAGGACCAGgtatgcaaat ... gttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTC
EST: gi|86034879|gb|DR330632.1|DR330632
EST:     TTGTTCTCGATGAAGCTGATGAAATGCTCTCCCGTGGTTTCAAGGACCAG                         ATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTC
genomic: TTGTTCTCGATGAAGCTGATGAAATGCTCTCCCGTGGTTTCAAGGACCAGgtatgcaaat ... gttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attccattctcgttatagtttaacttgaatctcactggtttctgggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA
                            atctcac  putative branch site (score: 3)
                                              ttttttc  putative PPT
            ttatagtttaactt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtatgcaaatatttctcagtgtttcaattccattctcgttatagtttaacttgaatctcactggtttctgggttttttcagATCTATGACATATTCCAGCTTCTTCCACCAAAGATCCAAGTTGGTGTGTTCTCCGCAACAATGCCACCAGAAGCTCTTGAGATCACAAGGAAGTTCATGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAA