1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaagacagtagcaaaatacagttttgcttttatatatgggattgaagaatgttgattaatgtgtgtttttggtttcagCTGATGGATTTGTGGTACAAACGGGAGATCCAGAGGGTCCTGCGGAAGGATTTATCGATCCAAGCACAGAGAAAACGAGGACGGTTCCTCTAGAGATTAT
species | Arabidopsis thaliana |
transcript | AT3G01480.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TGTGGACTTGGTAGAGAGGCATTTCTACGATGGCATGGAGATCCAGAGAT CTGATGGATTTGTGGTACAAACGGGAGATCCAGAGGGTEST: gi|124757528|gb|EH847658.1|EH847658
genomic: TGTGGACTTGGTAGAGAGGCATTTCTACGATGGCATGGAGATCCAGAGATgtaagacagt ... ttggtttcagCTGATGGATTTGTGGTACAAACGGGAGATCCAGAGGGT
EST: TGTGGACTTGGTAGAGAGGCATTTCTACGATGGCATGGAGATCCAGAGAT CTGATGGATTTGTGG
genomic: TGTGGACTTGGTAGAGAGGCATTTCTACGATGGCATGGAGATCCAGAGATgtaagacagt ... ttggtttcagCTGATGGATTTGTGG
ttgcttttatatatgggattgaagaatgttgattaatgtgtgtttttggtttcagCTGATGGATTTGTGGTACAAACGGGAGATCCAGAGGGTCCTGCGGAAGGATTTATCGATCCAAGCACAGAGAAAACGAGGACGGTTCCTCTAGAGATTAT
gattaat putative branch site (score: 3)
tgttttt putative PPT
tttatatat TA-rich tract