1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtatgcattctcttctcagcttttttattgttctaccatggtctagtcaaaattgttttatactttatcagttaagatataattggatgttaattttgcgaacaatgtgctgaatcagcacatagttctgttattgtcttattgaacacatttttattttacttacctgcagAGGGTAGCTGACTTTACCAGCTGTGCATCCATATTTTTGGAAAAGAGAACACCTGATGGCGCATCTGACGCATTGGTTCCAATTGCCAATGCCTTATCAA
species | Arabidopsis thaliana |
transcript | AT2G41520.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TGGATCGACGAACTACTATAGAAGCAGCTGAAGGCTTACAACAGGCTCAA AGGGTAGCTGACTTTACCAGCTGTGCATCCATATTTTTGGAAAAGAGAACA
genomic: TGGATCGACGAACTACTATAGAAGCAGCTGAAGGTTTACAACAGGCTCAAgtatgcattc ... ttacctgcagAGGGTAGCTGACTTTACCAGCTGTGCATCCATATTTTTGGAAAAGAGAACA
gcacatagttctgttattgtcttattgaacacatttttattttacttacctgcagAGGGTAGCTGACTTTACCAGCTGTGCATCCATATTTTTGGAAAAGAGAACACCTGATGGCGCATCTGACGCATTGGTTCCAATTGCCAATGCCTTATCAA
tacttac putative branch site (score: 1)
tttttattttactt CT-rich tract
ttattgaacacatttt TA-rich tract