1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtatgatcttttaacctccatgagaatttcgacaatgtgtttacatgaatctaaaccacttgaaattgtttaaaatgtgtcgtatgcttattaacagGGATTGACAGAGAAGTTCAGGGAGAACGACCCTGGTTACACAGGCTACGCAACGCTCTCTTACGATGTCTTCATGTTGATGGTCATTCCGTTCATCGCCA
species | Arabidopsis thaliana |
transcript | AT2G27480.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CCTCGAGTGTGGGATGATTGTGAAG GGATTGACAGAGAAGTTCAGGGAGAACGACCCCTGGTTACACAGGCTACCC
genomic: CCTCGAGTGTGGGATGATTGTGAAGgtatgatctt ... ttattaacagGGATTGACAGAGAAGTTCAGGGAGAACGA-CCCTGGTTACACAGGCTACGC
acatgaatctaaaccacttgaaattgtttaaaatgtgtcgtatgcttattaacagGGATTGACAGAGAAGTTCAGGGAGAACGACCCTGGTTACACAGGCTACGCAACGCTCTCTTACGATGTCTTCATGTTGATGGTCATTCCGTTCATCGCCA
atctaaa putative branch site (score: 3)
ttgaaattgtttaaaa TA-rich tract