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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaatgtattcttttatttaacataatgctttcgagggtatgcaacaaaaaaacatctttacaaaaaactatgcattggatcggcaaatttgatgtgtgtttgttgcctgtatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTCATGGCCAAGGCTAATGTCGTTATCAATCTAATTG

Basic information

species Arabidopsis thaliana
transcript AT2G20360.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT2G20360.1 (Arabidopsis thaliana), 3'ss of exon 4
lower sequence: Vv07s0005g04440.t01 (Vitis vinifera), 3'ss of exon 4
gtaatgtattcttttatttaacataatgctttcgagggtatgcaacaaaaaaacatctttacaaaaaactatgcattggatcggcaaatttgatgtgtgtttgttgcctgtatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTCATGGCCAAGGCTAATGTCGTTATCAATCTAATTG
|||   ||     | |||||    | || ||   |   | | ||        || |   |   || |    |      | |       ||| || |    || ||| |||    |  ||| | |||||||||||||   |||||||||||||| | ||||| ||||| || ||||| || ||||| || ||| ||||||| ||||
gtagaataaatggtgattta-ttcattgattc--aaattttccatttgtgtgac-ttggtgggaacagtagtttggctggtatttccttttaatttagactttttgactgatactatcagATAGTACCAATGAAATACAATCCAAGAGATGAAAATTCGATCAAGGCAGTAATGGCGAAAGCTAACGTTGTTCTCAATCTTATTG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86048717|gb|DR344472.1|DR344472
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|116387772|gb|EG430364.1|EG430364
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048723|gb|DR344478.1|DR344478
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTANGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTTCGATTAAGGCTGT
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACT-CGATTAAGGCTGT
EST: gi|86048716|gb|DR344471.1|DR344471
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|116377195|gb|EG419787.1|EG419787
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048731|gb|DR344486.1|DR344486
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGAT
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGAT
EST: gi|86048712|gb|DR344467.1|DR344467
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048709|gb|DR344464.1|DR344464
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048725|gb|DR344480.1|DR344480
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048700|gb|DR344455.1|DR344455
EST:     CTCAGAGGACTCTCCTCGASATCTCAAGTTGGATGGGAGATTTAGGACAG                         GTGGTAC-AATGAAATTTGATCCAAGAGATGAAGACTC
genomic: CTCAGAGGACTCTCCTCGACATCTCAAGTTG-ATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTC
EST: gi|125056448|gb|EL126177.1|EL126177
EST:     CTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGA
genomic: CTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGA
EST: gi|86048708|gb|DR344463.1|DR344463
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|116377193|gb|EG419785.1|EG419785
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048720|gb|DR344475.1|DR344475
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048692|gb|DR344447.1|DR344447
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048698|gb|DR344453.1|DR344453
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|125009733|gb|EL082002.1|EL082002
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTT
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTT
EST: gi|86048728|gb|DR344483.1|DR344483
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048733|gb|DR344488.1|DR344488
EST:     CTCAGAGGACTCTCCTCGACATCTCAAGTTGATTGGGAGATTTAGGACAG                         GTGGTACCAATGAAATT
genomic: CTCAGAGGACTCTCCTCGACATCTCAAGTTGAT-GGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATT
EST: gi|86048697|gb|DR344452.1|DR344452
EST:     GCTCAGAGGACTCTCCTCGNNNTCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAGGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048727|gb|DR344482.1|DR344482
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|124738189|gb|EH829591.1|EH829591
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAAT
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAAT
EST: gi|86048729|gb|DR344484.1|DR344484
EST:     CTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAA
genomic: CTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGA-GATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAA
EST: gi|86048714|gb|DR344469.1|DR344469
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048718|gb|DR344473.1|DR344473
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAAGACTCGATTAAGGCTGT
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAA-GACTCGATTAAGGCTGT
EST: gi|86048726|gb|DR344481.1|DR344481
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048710|gb|DR344465.1|DR344465
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048706|gb|DR344461.1|DR344461
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048734|gb|DR344489.1|DR344489
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048691|gb|DR344446.1|DR344446
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048688|gb|DR344443.1|DR344443
EST:     CTCAGAGGASTCTSCTCGASATGCTCAAGTTGATGGGAGATTTAAGACAG                         GTGGTAC-AATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: CTCAGAGGACTCTCCTCGACAT-CTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048737|gb|DR344492.1|DR344492
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|116377192|gb|EG419784.1|EG419784
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|116377191|gb|EG419783.1|EG419783
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048721|gb|DR344476.1|DR344476
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|116377190|gb|EG419782.1|EG419782
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|116377199|gb|EG419791.1|EG419791
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|116377200|gb|EG419792.1|EG419792
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048704|gb|DR344459.1|DR344459
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGG
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGG
EST: gi|86048722|gb|DR344477.1|DR344477
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTAC-AATGAAATTTGATCCAAGAGATGAAGACTCGATT
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATT
EST: gi|86048738|gb|DR344493.1|DR344493
EST:     GSTCAGAGGASTCTCCTCGACATCTCAAGTTGATGGGAGATTTAKGACAM                         GTGGTACCAATGAAATTTGATCCAAGAGATGDAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|116377196|gb|EG419788.1|EG419788
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|116377187|gb|EG419779.1|EG419779
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048693|gb|DR344448.1|DR344448
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGANNG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048732|gb|DR344487.1|DR344487
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048730|gb|DR344485.1|DR344485
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048711|gb|DR344466.1|DR344466
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048690|gb|DR344445.1|DR344445
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048735|gb|DR344490.1|DR344490
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048713|gb|DR344468.1|DR344468
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAANTTTGATCCAAGAGATGAANACTCGATTAAGGCTGGC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
EST: gi|86048696|gb|DR344451.1|DR344451
EST:     GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAG                         GTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC
genomic: GCTCAGAGGACTCTCCTCGACATCTCAAGTTGATGGGAGATTTAGGACAGgtaatgtatt ... tatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaactatgcattggatcggcaaatttgatgtgtgtttgttgcctgtatattccagGTGGTACCAATGAAATTTGATCCAAGAGATGAAGACTCGATTAAGGCTGTCATGGCCAAGGCTAATGTCGTTATCAATCTAATTG
                      atttgat  putative branch site (score: 5)
                    aaatttgat  TA-rich tract