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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtactttgttcatcagattctgttttgtacccctgaactgaagtgttgttcttttacagacttacttctgttctgtggtgcagATCATTCAAGACTTAGGCTCACTCATGAGACTTCTTTTGTGAGAGAACATACAAGTTTCTGGACAACAACTCCTTTCTTCTTTTACGTC

Basic information

species Arabidopsis thaliana
transcript AT2G17430.1
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

acccctgaactgaagtgttgttcttttacagacttacttctgttctgtggtgcagATCATTCAAGACTTAGGCTCACTCATGAGACTTCTTTTGTGAGAGAACATACAAGTTTCTGGACAACAACTCCTTTCTTCTTTTACGTC
                              gacttac  putative branch site (score: 2)
                                cttacttctgttct  CT-rich tract
                    ttctttta  TA-rich tract