1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaagtaattaacaaaatcaatttatgtgtgtgttaatcttttgtataatggtttttcttttgtgttgtttttagTGCCACCGCGGGTTAGTGAGAGCTCAAGAATGAGGAAGCCATTTCTTAGTGAGCCTGAACAATCAGTTTCTAAGTCCTTACCTACTAATTACTCCTACCT
species | Arabidopsis thaliana |
transcript | AT2G05160.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ATGCGATATGGCT-TAAATTTATTGAGAGAGACATAGAGATGAACACAT TGCCCCCGCGGGTTAGTGAGAGCTCAAGAATGAGGAAGCCATTTCTTAGTG
genomic: ATGCGATATGGCTCTAAATTTATTGAGAGAGACATAGAGATGAACACATgtaagtaatt ... ttgtttttagTGCCACCGCGGGTTAGTGAGAGCTCAAGAATGAGGAAGCCATTTCTTAGTG
atttatgtgtgtgttaatcttttgtataatggtttttcttttgtgttgtttttagTGCCACCGCGGGTTAGTGAGAGCTCAAGAATGAGGAAGCCATTTCTTAGTGAGCCTGAACAATCAGTTTCTAAGTCCTTACCTACTAATTACTCCTACCT
tgttaat putative branch site (score: 3)
tttttcttttgtgttg putative PPT
ttaatcttttgtataa TA-rich tract