1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtactctctttgtggtggttttggtgttgggtatgagatatagggacataaattttggcatgtcttttgggaagtggttgagtctgattttaagtaatccagGGAAATGCCCAGAGGCCTGAAATACGCATTGTATCATGGAACAATGATGAACTCACAATGGATGCTCTTCCTGTACACGGCTTTGAGCATTACAAGGCGA
species | Arabidopsis thaliana |
transcript | AT1G08190.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AAGGAGATGGTGAGAAGGAATTTAGCAGCACCACTACTCTATCGCGTCAG GGAAATGCCCAGAGGCCTGAAATACGCATTGTATCATGGAACAATGATGAAEST: gi|124860986|gb|EH945423.1|EH945423
genomic: AAGGAGATGGTGAGAAGGAATTTAGCAGCACCACTACTCTATCGCGTCAGgtactctctt ... agtaatccagGGAAATGCCCAGAGGCCTGAAATACGCATTGTATCATGGAACAATGATGAA
EST: GAATTTAGCAGCACCACTACTCTATCGCGTCAG GGAAATGCCCAGAGGCCTGAAATACGCATTGTATCATGGAACAATGATGAA
genomic: GAATTTAGCAGCACCACTACTCTATCGCGTCAGgtactctctt ... agtaatccagGGAAATGCCCAGAGGCCTGAAATACGCATTGTATCATGGAACAATGATGAA
ataaattttggcatgtcttttgggaagtggttgagtctgattttaagtaatccagGGAAATGCCCAGAGGCCTGAAATACGCATTGTATCATGGAACAATGATGAACTCACAATGGATGCTCTTCCTGTACACGGCTTTGAGCATTACAAGGCGA
gtctgat putative branch site (score: 4)
tgattttaagtaat TA-rich tract