1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtacttcattttgccttgtcctctctgagttttcttagtttttgtattcgttggttaaccaaaagtcggtgggaaaaccattaggacagAGGCAAAAGGGAGTAATTGCAAGGTCGGTCCTTCTCAGACCAGGTGGTCGTTTAGCATGTGAATTGTCGCGTCACGGAGTTATTCTCCGTGTTAATAACT
species | Arabidopsis thaliana |
transcript | AT1G07010.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GATAGGAGGAGTTCTCAAACCTATTGGGATCAATGGAATAAGTAGTAAAG AGGCAAAAGGGAGTAATTGCAAGGEST: gi|116396058|gb|EG438650.1|EG438650
genomic: GATAGGAGGAGTTCTCAAACCTATTGGGATCAATGGAAT--GTAGTAAAGgtacttcatt ... attaggacagAGGCAAAAGGGAGTAATTGCAAGG
EST: AAGATAGGAGGAGTTCTCAAACCTATTGGGATCAATGGAATGTAGTAAAG AGGCAAAAGGGAGTAATTGCAAGGTCGGTCCTTCTCAGACCAGGTGGTCGT
genomic: AAGATAGGAGGAGTTCTCAAACCTATTGGGATCAATGGAATGTAGTAAAGgtacttcatt ... attaggacagAGGCAAAAGGGAGTAATTGCAAGGTCGGTCCTTCTCAGACCAGGTGGTCGT
ttagtttttgtattcgttggttaaccaaaagtcggtgggaaaaccattaggacagAGGCAAAAGGGAGTAATTGCAAGGTCGGTCCTTCTCAGACCAGGTGGTCGTTTAGCATGTGAATTGTCGCGTCACGGAGTTATTCTCCGTGTTAATAACT
ggttaac putative branch site (score: 3)
ttttgtatt TA-rich tract